Gene : Cucsa.284500 C. sativus v1.0
Defline:  (1 of 39) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  196
Name:  ? Cucsa.284500 Secondary Identifier:  ? PAC:16974707
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.284500 0.5kb upstream 0.5kb upstream 2632 true scaffold02653: 1256417-1259048 Cucumis sativus
Cucsa.284500 0.5kb upstream 0.5kb upstream 500 false scaffold02653: 1258549-1259048 Cucumis sativus
Cucsa.284500 0.5kb downstream 0.5kb downstream 2632 true scaffold02653: 1255917-1258548 Cucumis sativus
Cucsa.284500 0.5kb downstream 0.5kb downstream 500 false scaffold02653: 1255917-1256416 Cucumis sativus
Cucsa.284500 1.0kb upstream 1.0kb upstream 3132 true scaffold02653: 1256417-1259548 Cucumis sativus
Cucsa.284500 1.0kb upstream 1.0kb upstream 1000 false scaffold02653: 1258549-1259548 Cucumis sativus
Cucsa.284500 1.0kb downstream 1.0kb downstream 3132 true scaffold02653: 1255417-1258548 Cucumis sativus
Cucsa.284500 1.0kb downstream 1.0kb downstream 1000 false scaffold02653: 1255417-1256416 Cucumis sativus
Cucsa.284500 2.0kb upstream 2.0kb upstream 4132 true scaffold02653: 1256417-1260548 Cucumis sativus
Cucsa.284500 2.0kb upstream 2.0kb upstream 2000 false scaffold02653: 1258549-1260548 Cucumis sativus
Cucsa.284500 2.0kb downstream 2.0kb downstream 4132 true scaffold02653: 1254417-1258548 Cucumis sativus
Cucsa.284500 2.0kb downstream 2.0kb downstream 2000 false scaffold02653: 1254417-1256416 Cucumis sativus
Cucsa.284500 5.0kb upstream 5.0kb upstream 7132 true scaffold02653: 1256417-1263548 Cucumis sativus
Cucsa.284500 5.0kb upstream 5.0kb upstream 5000 false scaffold02653: 1258549-1263548 Cucumis sativus
Cucsa.284500 5.0kb downstream 5.0kb downstream 7132 true scaffold02653: 1251417-1258548 Cucumis sativus
Cucsa.284500 5.0kb downstream 5.0kb downstream 5000 false scaffold02653: 1251417-1256416 Cucumis sativus
Cucsa.284500 10.0kb upstream 10.0kb upstream 12132 true scaffold02653: 1256417-1268548 Cucumis sativus
Cucsa.284500 10.0kb upstream 10.0kb upstream 10000 false scaffold02653: 1258549-1268548 Cucumis sativus
Cucsa.284500 10.0kb downstream 10.0kb downstream 12132 true scaffold02653: 1246417-1258548 Cucumis sativus
Cucsa.284500 10.0kb downstream 10.0kb downstream 10000 false scaffold02653: 1246417-1256416 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305086 5265 Fabidae View MSA
124072488 5270 Rosid View MSA
123739877 5271 Pentapetalae View MSA
122787061 5272 Eudicot View MSA
122043654 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351271 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain