Gene : Cucsa.288970 C. sativus v1.0
Defline:  (1 of 3) PTHR10314:SF97 - BIFUNCTIONAL L-3-CYANOALANINE SYNTHASE/CYSTEINE SYNTHASE D1-RELATED Genomic Order:  52
Name:  ? Cucsa.288970 Secondary Identifier:  ? PAC:16975149
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus CYSTSYN-PWY Cucumis sativus pathologic  
Csativus PWY-6936 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.288970 0.5kb upstream 0.5kb upstream 7313 true scaffold02698: 464067-471379 Cucumis sativus
Cucsa.288970 0.5kb upstream 0.5kb upstream 500 false scaffold02698: 464067-464566 Cucumis sativus
Cucsa.288970 0.5kb downstream 0.5kb downstream 7313 true scaffold02698: 464567-471879 Cucumis sativus
Cucsa.288970 0.5kb downstream 0.5kb downstream 500 false scaffold02698: 471380-471879 Cucumis sativus
Cucsa.288970 1.0kb upstream 1.0kb upstream 7813 true scaffold02698: 463567-471379 Cucumis sativus
Cucsa.288970 1.0kb upstream 1.0kb upstream 1000 false scaffold02698: 463567-464566 Cucumis sativus
Cucsa.288970 1.0kb downstream 1.0kb downstream 7813 true scaffold02698: 464567-472379 Cucumis sativus
Cucsa.288970 1.0kb downstream 1.0kb downstream 1000 false scaffold02698: 471380-472379 Cucumis sativus
Cucsa.288970 2.0kb upstream 2.0kb upstream 8813 true scaffold02698: 462567-471379 Cucumis sativus
Cucsa.288970 2.0kb upstream 2.0kb upstream 2000 false scaffold02698: 462567-464566 Cucumis sativus
Cucsa.288970 2.0kb downstream 2.0kb downstream 8813 true scaffold02698: 464567-473379 Cucumis sativus
Cucsa.288970 2.0kb downstream 2.0kb downstream 2000 false scaffold02698: 471380-473379 Cucumis sativus
Cucsa.288970 5.0kb upstream 5.0kb upstream 11813 true scaffold02698: 459567-471379 Cucumis sativus
Cucsa.288970 5.0kb upstream 5.0kb upstream 5000 false scaffold02698: 459567-464566 Cucumis sativus
Cucsa.288970 5.0kb downstream 5.0kb downstream 11813 true scaffold02698: 464567-476379 Cucumis sativus
Cucsa.288970 5.0kb downstream 5.0kb downstream 5000 false scaffold02698: 471380-476379 Cucumis sativus
Cucsa.288970 10.0kb upstream 10.0kb upstream 16813 true scaffold02698: 454567-471379 Cucumis sativus
Cucsa.288970 10.0kb upstream 10.0kb upstream 10000 false scaffold02698: 454567-464566 Cucumis sativus
Cucsa.288970 10.0kb downstream 10.0kb downstream 16813 true scaffold02698: 464567-481379 Cucumis sativus
Cucsa.288970 10.0kb downstream 10.0kb downstream 10000 false scaffold02698: 471380-481379 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605011 5273 Angiosperm Singleton cluster - no MSA
122235273 5265 Fabidae Singleton cluster - no MSA
123981490 5270 Rosid Singleton cluster - no MSA
123557165 5271 Pentapetalae Singleton cluster - no MSA
122591979 5272 Eudicot Singleton cluster - no MSA
120877301 5274 Embryophyte Singleton cluster - no MSA
122918190 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain