Gene : Cucsa.289160 C. sativus v1.0
Defline:  (1 of 5) PTHR10003 - SUPEROXIDE DISMUTASE CU-ZN -RELATED Genomic Order:  71
Name:  ? Cucsa.289160 Secondary Identifier:  ? PAC:16975187
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus DETOX1-PWY Cucumis sativus pathologic  
Csativus DETOX1-PWY-1 Cucumis sativus pathologic  
Csativus PWY-6854 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.289160 0.5kb upstream 0.5kb upstream 3518 true scaffold02698: 645362-648879 Cucumis sativus
Cucsa.289160 0.5kb upstream 0.5kb upstream 500 false scaffold02698: 648380-648879 Cucumis sativus
Cucsa.289160 0.5kb downstream 0.5kb downstream 3518 true scaffold02698: 644862-648379 Cucumis sativus
Cucsa.289160 0.5kb downstream 0.5kb downstream 500 false scaffold02698: 644862-645361 Cucumis sativus
Cucsa.289160 1.0kb upstream 1.0kb upstream 4018 true scaffold02698: 645362-649379 Cucumis sativus
Cucsa.289160 1.0kb upstream 1.0kb upstream 1000 false scaffold02698: 648380-649379 Cucumis sativus
Cucsa.289160 1.0kb downstream 1.0kb downstream 4018 true scaffold02698: 644362-648379 Cucumis sativus
Cucsa.289160 1.0kb downstream 1.0kb downstream 1000 false scaffold02698: 644362-645361 Cucumis sativus
Cucsa.289160 2.0kb upstream 2.0kb upstream 5018 true scaffold02698: 645362-650379 Cucumis sativus
Cucsa.289160 2.0kb upstream 2.0kb upstream 2000 false scaffold02698: 648380-650379 Cucumis sativus
Cucsa.289160 2.0kb downstream 2.0kb downstream 5018 true scaffold02698: 643362-648379 Cucumis sativus
Cucsa.289160 2.0kb downstream 2.0kb downstream 2000 false scaffold02698: 643362-645361 Cucumis sativus
Cucsa.289160 5.0kb upstream 5.0kb upstream 8018 true scaffold02698: 645362-653379 Cucumis sativus
Cucsa.289160 5.0kb upstream 5.0kb upstream 5000 false scaffold02698: 648380-653379 Cucumis sativus
Cucsa.289160 5.0kb downstream 5.0kb downstream 8018 true scaffold02698: 640362-648379 Cucumis sativus
Cucsa.289160 5.0kb downstream 5.0kb downstream 5000 false scaffold02698: 640362-645361 Cucumis sativus
Cucsa.289160 10.0kb upstream 10.0kb upstream 13018 true scaffold02698: 645362-658379 Cucumis sativus
Cucsa.289160 10.0kb upstream 10.0kb upstream 10000 false scaffold02698: 648380-658379 Cucumis sativus
Cucsa.289160 10.0kb downstream 10.0kb downstream 13018 true scaffold02698: 635362-648379 Cucumis sativus
Cucsa.289160 10.0kb downstream 10.0kb downstream 10000 false scaffold02698: 635362-645361 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305019 5265 Fabidae View MSA
124071759 5270 Rosid View MSA
123743890 5271 Pentapetalae View MSA
122797763 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain