Gene : Cucsa.291570 C. sativus v1.0
Defline:  (1 of 1) PTHR23083//PTHR23083:SF380 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR Genomic Order:  7
Name:  ? Cucsa.291570 Secondary Identifier:  ? PAC:16975239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.291570 0.5kb upstream 0.5kb upstream 2897 true scaffold02766: 124400-127296 Cucumis sativus
Cucsa.291570 0.5kb upstream 0.5kb upstream 500 false scaffold02766: 126797-127296 Cucumis sativus
Cucsa.291570 0.5kb downstream 0.5kb downstream 2897 true scaffold02766: 123900-126796 Cucumis sativus
Cucsa.291570 0.5kb downstream 0.5kb downstream 500 false scaffold02766: 123900-124399 Cucumis sativus
Cucsa.291570 1.0kb upstream 1.0kb upstream 3397 true scaffold02766: 124400-127796 Cucumis sativus
Cucsa.291570 1.0kb upstream 1.0kb upstream 1000 false scaffold02766: 126797-127796 Cucumis sativus
Cucsa.291570 1.0kb downstream 1.0kb downstream 3397 true scaffold02766: 123400-126796 Cucumis sativus
Cucsa.291570 1.0kb downstream 1.0kb downstream 1000 false scaffold02766: 123400-124399 Cucumis sativus
Cucsa.291570 2.0kb upstream 2.0kb upstream 4397 true scaffold02766: 124400-128796 Cucumis sativus
Cucsa.291570 2.0kb upstream 2.0kb upstream 2000 false scaffold02766: 126797-128796 Cucumis sativus
Cucsa.291570 2.0kb downstream 2.0kb downstream 4397 true scaffold02766: 122400-126796 Cucumis sativus
Cucsa.291570 2.0kb downstream 2.0kb downstream 2000 false scaffold02766: 122400-124399 Cucumis sativus
Cucsa.291570 5.0kb upstream 5.0kb upstream 7397 true scaffold02766: 124400-131796 Cucumis sativus
Cucsa.291570 5.0kb upstream 5.0kb upstream 5000 false scaffold02766: 126797-131796 Cucumis sativus
Cucsa.291570 5.0kb downstream 5.0kb downstream 7397 true scaffold02766: 119400-126796 Cucumis sativus
Cucsa.291570 5.0kb downstream 5.0kb downstream 5000 false scaffold02766: 119400-124399 Cucumis sativus
Cucsa.291570 10.0kb upstream 10.0kb upstream 12397 true scaffold02766: 124400-136796 Cucumis sativus
Cucsa.291570 10.0kb upstream 10.0kb upstream 10000 false scaffold02766: 126797-136796 Cucumis sativus
Cucsa.291570 10.0kb downstream 10.0kb downstream 12397 true scaffold02766: 114400-126796 Cucumis sativus
Cucsa.291570 10.0kb downstream 10.0kb downstream 10000 false scaffold02766: 114400-124399 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303934 5265 Fabidae View MSA
124068399 5270 Rosid View MSA
123739608 5271 Pentapetalae View MSA
122792397 5272 Eudicot View MSA
122043324 5273 Angiosperm View MSA
121346107 5274 Embryophyte View MSA
123380332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain