Gene : Cucsa.291720 C. sativus v1.0
Defline:  (1 of 3) 5.4.99.27 - tRNA pseudouridine(13) synthase / tRNA Psi(13) synthase Genomic Order:  21
Name:  ? Cucsa.291720 Secondary Identifier:  ? PAC:16975260
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.291720 0.5kb upstream 0.5kb upstream 2333 true scaffold02766: 279268-281600 Cucumis sativus
Cucsa.291720 0.5kb upstream 0.5kb upstream 500 false scaffold02766: 279268-279767 Cucumis sativus
Cucsa.291720 0.5kb downstream 0.5kb downstream 2333 true scaffold02766: 279768-282100 Cucumis sativus
Cucsa.291720 0.5kb downstream 0.5kb downstream 500 false scaffold02766: 281601-282100 Cucumis sativus
Cucsa.291720 1.0kb upstream 1.0kb upstream 2833 true scaffold02766: 278768-281600 Cucumis sativus
Cucsa.291720 1.0kb upstream 1.0kb upstream 1000 false scaffold02766: 278768-279767 Cucumis sativus
Cucsa.291720 1.0kb downstream 1.0kb downstream 2833 true scaffold02766: 279768-282600 Cucumis sativus
Cucsa.291720 1.0kb downstream 1.0kb downstream 1000 false scaffold02766: 281601-282600 Cucumis sativus
Cucsa.291720 2.0kb upstream 2.0kb upstream 3833 true scaffold02766: 277768-281600 Cucumis sativus
Cucsa.291720 2.0kb upstream 2.0kb upstream 2000 false scaffold02766: 277768-279767 Cucumis sativus
Cucsa.291720 2.0kb downstream 2.0kb downstream 3833 true scaffold02766: 279768-283600 Cucumis sativus
Cucsa.291720 2.0kb downstream 2.0kb downstream 2000 false scaffold02766: 281601-283600 Cucumis sativus
Cucsa.291720 5.0kb upstream 5.0kb upstream 6833 true scaffold02766: 274768-281600 Cucumis sativus
Cucsa.291720 5.0kb upstream 5.0kb upstream 5000 false scaffold02766: 274768-279767 Cucumis sativus
Cucsa.291720 5.0kb downstream 5.0kb downstream 6833 true scaffold02766: 279768-286600 Cucumis sativus
Cucsa.291720 5.0kb downstream 5.0kb downstream 5000 false scaffold02766: 281601-286600 Cucumis sativus
Cucsa.291720 10.0kb upstream 10.0kb upstream 11833 true scaffold02766: 269768-281600 Cucumis sativus
Cucsa.291720 10.0kb upstream 10.0kb upstream 10000 false scaffold02766: 269768-279767 Cucumis sativus
Cucsa.291720 10.0kb downstream 10.0kb downstream 11833 true scaffold02766: 279768-291600 Cucumis sativus
Cucsa.291720 10.0kb downstream 10.0kb downstream 10000 false scaffold02766: 281601-291600 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605033 5273 Angiosperm Singleton cluster - no MSA
122235295 5265 Fabidae Singleton cluster - no MSA
123981512 5270 Rosid Singleton cluster - no MSA
123557187 5271 Pentapetalae Singleton cluster - no MSA
122592001 5272 Eudicot Singleton cluster - no MSA
120877323 5274 Embryophyte Singleton cluster - no MSA
122918212 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain