Gene : Cucsa.291650 C. sativus v1.0
Defline:  (1 of 74) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  16
Name:  ? Cucsa.291650 Secondary Identifier:  ? PAC:16975253
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.291650 0.5kb upstream 0.5kb upstream 2641 true scaffold02766: 216699-219339 Cucumis sativus
Cucsa.291650 0.5kb upstream 0.5kb upstream 500 false scaffold02766: 218840-219339 Cucumis sativus
Cucsa.291650 0.5kb downstream 0.5kb downstream 2641 true scaffold02766: 216199-218839 Cucumis sativus
Cucsa.291650 0.5kb downstream 0.5kb downstream 500 false scaffold02766: 216199-216698 Cucumis sativus
Cucsa.291650 1.0kb upstream 1.0kb upstream 3141 true scaffold02766: 216699-219839 Cucumis sativus
Cucsa.291650 1.0kb upstream 1.0kb upstream 1000 false scaffold02766: 218840-219839 Cucumis sativus
Cucsa.291650 1.0kb downstream 1.0kb downstream 3141 true scaffold02766: 215699-218839 Cucumis sativus
Cucsa.291650 1.0kb downstream 1.0kb downstream 1000 false scaffold02766: 215699-216698 Cucumis sativus
Cucsa.291650 2.0kb upstream 2.0kb upstream 4141 true scaffold02766: 216699-220839 Cucumis sativus
Cucsa.291650 2.0kb upstream 2.0kb upstream 2000 false scaffold02766: 218840-220839 Cucumis sativus
Cucsa.291650 2.0kb downstream 2.0kb downstream 4141 true scaffold02766: 214699-218839 Cucumis sativus
Cucsa.291650 2.0kb downstream 2.0kb downstream 2000 false scaffold02766: 214699-216698 Cucumis sativus
Cucsa.291650 5.0kb upstream 5.0kb upstream 7141 true scaffold02766: 216699-223839 Cucumis sativus
Cucsa.291650 5.0kb upstream 5.0kb upstream 5000 false scaffold02766: 218840-223839 Cucumis sativus
Cucsa.291650 5.0kb downstream 5.0kb downstream 7141 true scaffold02766: 211699-218839 Cucumis sativus
Cucsa.291650 5.0kb downstream 5.0kb downstream 5000 false scaffold02766: 211699-216698 Cucumis sativus
Cucsa.291650 10.0kb upstream 10.0kb upstream 12141 true scaffold02766: 216699-228839 Cucumis sativus
Cucsa.291650 10.0kb upstream 10.0kb upstream 10000 false scaffold02766: 218840-228839 Cucumis sativus
Cucsa.291650 10.0kb downstream 10.0kb downstream 12141 true scaffold02766: 206699-218839 Cucumis sativus
Cucsa.291650 10.0kb downstream 10.0kb downstream 10000 false scaffold02766: 206699-216698 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309488 5265 Fabidae View MSA
124069931 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain