Gene : Cucsa.296510 C. sativus v1.0
Defline:  (1 of 89) PTHR10178:SF14 - RETROVIRUS POLYPROTEIN Genomic Order:  1
Name:  ? Cucsa.296510 Secondary Identifier:  ? PAC:16975412
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.296510 0.5kb upstream 0.5kb upstream 533 true scaffold02863: 60-592 Cucumis sativus
Cucsa.296510 0.5kb upstream 0.5kb upstream 16 false scaffold02863: 577-592 Cucumis sativus
Cucsa.296510 0.5kb downstream 0.5kb downstream 576 true scaffold02863: 1-576 Cucumis sativus
Cucsa.296510 0.5kb downstream 0.5kb downstream 59 false scaffold02863: 1-59 Cucumis sativus
Cucsa.296510 1.0kb upstream 1.0kb upstream 533 true scaffold02863: 60-592 Cucumis sativus
Cucsa.296510 1.0kb upstream 1.0kb upstream 16 false scaffold02863: 577-592 Cucumis sativus
Cucsa.296510 1.0kb downstream 1.0kb downstream 576 true scaffold02863: 1-576 Cucumis sativus
Cucsa.296510 1.0kb downstream 1.0kb downstream 59 false scaffold02863: 1-59 Cucumis sativus
Cucsa.296510 2.0kb upstream 2.0kb upstream 533 true scaffold02863: 60-592 Cucumis sativus
Cucsa.296510 2.0kb upstream 2.0kb upstream 16 false scaffold02863: 577-592 Cucumis sativus
Cucsa.296510 2.0kb downstream 2.0kb downstream 576 true scaffold02863: 1-576 Cucumis sativus
Cucsa.296510 2.0kb downstream 2.0kb downstream 59 false scaffold02863: 1-59 Cucumis sativus
Cucsa.296510 5.0kb upstream 5.0kb upstream 533 true scaffold02863: 60-592 Cucumis sativus
Cucsa.296510 5.0kb upstream 5.0kb upstream 16 false scaffold02863: 577-592 Cucumis sativus
Cucsa.296510 5.0kb downstream 5.0kb downstream 576 true scaffold02863: 1-576 Cucumis sativus
Cucsa.296510 5.0kb downstream 5.0kb downstream 59 false scaffold02863: 1-59 Cucumis sativus
Cucsa.296510 10.0kb upstream 10.0kb upstream 533 true scaffold02863: 60-592 Cucumis sativus
Cucsa.296510 10.0kb upstream 10.0kb upstream 16 false scaffold02863: 577-592 Cucumis sativus
Cucsa.296510 10.0kb downstream 10.0kb downstream 576 true scaffold02863: 1-576 Cucumis sativus
Cucsa.296510 10.0kb downstream 10.0kb downstream 59 false scaffold02863: 1-59 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605094 5273 Angiosperm Singleton cluster - no MSA
122235356 5265 Fabidae Singleton cluster - no MSA
123981573 5270 Rosid Singleton cluster - no MSA
123557248 5271 Pentapetalae Singleton cluster - no MSA
122592062 5272 Eudicot Singleton cluster - no MSA
120877384 5274 Embryophyte Singleton cluster - no MSA
122918273 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain