Gene : Cucsa.299440 C. sativus v1.0
Defline:  (1 of 1) PTHR23076//PTHR23076:SF73 - METALLOPROTEASE M41 FTSH Genomic Order:  5
Name:  ? Cucsa.299440 Secondary Identifier:  ? PAC:16975486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.299440 0.5kb upstream 0.5kb upstream 5094 true scaffold02920: 26021-31114 Cucumis sativus
Cucsa.299440 0.5kb upstream 0.5kb upstream 500 false scaffold02920: 30615-31114 Cucumis sativus
Cucsa.299440 0.5kb downstream 0.5kb downstream 5094 true scaffold02920: 25521-30614 Cucumis sativus
Cucsa.299440 0.5kb downstream 0.5kb downstream 500 false scaffold02920: 25521-26020 Cucumis sativus
Cucsa.299440 1.0kb upstream 1.0kb upstream 5594 true scaffold02920: 26021-31614 Cucumis sativus
Cucsa.299440 1.0kb upstream 1.0kb upstream 1000 false scaffold02920: 30615-31614 Cucumis sativus
Cucsa.299440 1.0kb downstream 1.0kb downstream 5594 true scaffold02920: 25021-30614 Cucumis sativus
Cucsa.299440 1.0kb downstream 1.0kb downstream 1000 false scaffold02920: 25021-26020 Cucumis sativus
Cucsa.299440 2.0kb upstream 2.0kb upstream 6594 true scaffold02920: 26021-32614 Cucumis sativus
Cucsa.299440 2.0kb upstream 2.0kb upstream 2000 false scaffold02920: 30615-32614 Cucumis sativus
Cucsa.299440 2.0kb downstream 2.0kb downstream 6594 true scaffold02920: 24021-30614 Cucumis sativus
Cucsa.299440 2.0kb downstream 2.0kb downstream 2000 false scaffold02920: 24021-26020 Cucumis sativus
Cucsa.299440 5.0kb upstream 5.0kb upstream 9594 true scaffold02920: 26021-35614 Cucumis sativus
Cucsa.299440 5.0kb upstream 5.0kb upstream 5000 false scaffold02920: 30615-35614 Cucumis sativus
Cucsa.299440 5.0kb downstream 5.0kb downstream 9594 true scaffold02920: 21021-30614 Cucumis sativus
Cucsa.299440 5.0kb downstream 5.0kb downstream 5000 false scaffold02920: 21021-26020 Cucumis sativus
Cucsa.299440 10.0kb upstream 10.0kb upstream 14594 true scaffold02920: 26021-40614 Cucumis sativus
Cucsa.299440 10.0kb upstream 10.0kb upstream 10000 false scaffold02920: 30615-40614 Cucumis sativus
Cucsa.299440 10.0kb downstream 10.0kb downstream 14594 true scaffold02920: 16021-30614 Cucumis sativus
Cucsa.299440 10.0kb downstream 10.0kb downstream 10000 false scaffold02920: 16021-26020 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306895 5265 Fabidae View MSA
124073797 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain