Gene : Cucsa.300050 C. sativus v1.0
Defline:  (1 of 2) PTHR24095:SF178 - ACETATE--COA LIGASE ACS, CHLOROPLASTIC/GLYOXYSOMAL Genomic Order:  7
Name:  ? Cucsa.300050 Secondary Identifier:  ? PAC:16975562
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY66-21 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.300050 0.5kb upstream 0.5kb upstream 4974 true scaffold02925: 69765-74738 Cucumis sativus
Cucsa.300050 0.5kb upstream 0.5kb upstream 500 false scaffold02925: 69765-70264 Cucumis sativus
Cucsa.300050 0.5kb downstream 0.5kb downstream 4974 true scaffold02925: 70265-75238 Cucumis sativus
Cucsa.300050 0.5kb downstream 0.5kb downstream 500 false scaffold02925: 74739-75238 Cucumis sativus
Cucsa.300050 1.0kb upstream 1.0kb upstream 5474 true scaffold02925: 69265-74738 Cucumis sativus
Cucsa.300050 1.0kb upstream 1.0kb upstream 1000 false scaffold02925: 69265-70264 Cucumis sativus
Cucsa.300050 1.0kb downstream 1.0kb downstream 5474 true scaffold02925: 70265-75738 Cucumis sativus
Cucsa.300050 1.0kb downstream 1.0kb downstream 1000 false scaffold02925: 74739-75738 Cucumis sativus
Cucsa.300050 2.0kb upstream 2.0kb upstream 6474 true scaffold02925: 68265-74738 Cucumis sativus
Cucsa.300050 2.0kb upstream 2.0kb upstream 2000 false scaffold02925: 68265-70264 Cucumis sativus
Cucsa.300050 2.0kb downstream 2.0kb downstream 6474 true scaffold02925: 70265-76738 Cucumis sativus
Cucsa.300050 2.0kb downstream 2.0kb downstream 2000 false scaffold02925: 74739-76738 Cucumis sativus
Cucsa.300050 5.0kb upstream 5.0kb upstream 9474 true scaffold02925: 65265-74738 Cucumis sativus
Cucsa.300050 5.0kb upstream 5.0kb upstream 5000 false scaffold02925: 65265-70264 Cucumis sativus
Cucsa.300050 5.0kb downstream 5.0kb downstream 9474 true scaffold02925: 70265-79738 Cucumis sativus
Cucsa.300050 5.0kb downstream 5.0kb downstream 5000 false scaffold02925: 74739-79738 Cucumis sativus
Cucsa.300050 10.0kb upstream 10.0kb upstream 14474 true scaffold02925: 60265-74738 Cucumis sativus
Cucsa.300050 10.0kb upstream 10.0kb upstream 10000 false scaffold02925: 60265-70264 Cucumis sativus
Cucsa.300050 10.0kb downstream 10.0kb downstream 14474 true scaffold02925: 70265-84738 Cucumis sativus
Cucsa.300050 10.0kb downstream 10.0kb downstream 10000 false scaffold02925: 74739-84738 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605118 5273 Angiosperm Singleton cluster - no MSA
122235381 5265 Fabidae Singleton cluster - no MSA
123981597 5270 Rosid Singleton cluster - no MSA
123557272 5271 Pentapetalae Singleton cluster - no MSA
122592086 5272 Eudicot Singleton cluster - no MSA
120877408 5274 Embryophyte Singleton cluster - no MSA
122918297 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain