Gene : Cucsa.300770 C. sativus v1.0
Defline:  (1 of 1) PTHR21087:SF4 - INACTIVE SHIKIMATE KINASE LIKE 1, CHLOROPLASTIC-RELATED Genomic Order:  26
Name:  ? Cucsa.300770 Secondary Identifier:  ? PAC:16975618
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.300770 0.5kb upstream 0.5kb upstream 3947 true scaffold02931: 347557-351503 Cucumis sativus
Cucsa.300770 0.5kb upstream 0.5kb upstream 500 false scaffold02931: 351004-351503 Cucumis sativus
Cucsa.300770 0.5kb downstream 0.5kb downstream 3947 true scaffold02931: 347057-351003 Cucumis sativus
Cucsa.300770 0.5kb downstream 0.5kb downstream 500 false scaffold02931: 347057-347556 Cucumis sativus
Cucsa.300770 1.0kb upstream 1.0kb upstream 4447 true scaffold02931: 347557-352003 Cucumis sativus
Cucsa.300770 1.0kb upstream 1.0kb upstream 1000 false scaffold02931: 351004-352003 Cucumis sativus
Cucsa.300770 1.0kb downstream 1.0kb downstream 4447 true scaffold02931: 346557-351003 Cucumis sativus
Cucsa.300770 1.0kb downstream 1.0kb downstream 1000 false scaffold02931: 346557-347556 Cucumis sativus
Cucsa.300770 2.0kb upstream 2.0kb upstream 5447 true scaffold02931: 347557-353003 Cucumis sativus
Cucsa.300770 2.0kb upstream 2.0kb upstream 2000 false scaffold02931: 351004-353003 Cucumis sativus
Cucsa.300770 2.0kb downstream 2.0kb downstream 5447 true scaffold02931: 345557-351003 Cucumis sativus
Cucsa.300770 2.0kb downstream 2.0kb downstream 2000 false scaffold02931: 345557-347556 Cucumis sativus
Cucsa.300770 5.0kb upstream 5.0kb upstream 8447 true scaffold02931: 347557-356003 Cucumis sativus
Cucsa.300770 5.0kb upstream 5.0kb upstream 5000 false scaffold02931: 351004-356003 Cucumis sativus
Cucsa.300770 5.0kb downstream 5.0kb downstream 8447 true scaffold02931: 342557-351003 Cucumis sativus
Cucsa.300770 5.0kb downstream 5.0kb downstream 5000 false scaffold02931: 342557-347556 Cucumis sativus
Cucsa.300770 10.0kb upstream 10.0kb upstream 13447 true scaffold02931: 347557-361003 Cucumis sativus
Cucsa.300770 10.0kb upstream 10.0kb upstream 10000 false scaffold02931: 351004-361003 Cucumis sativus
Cucsa.300770 10.0kb downstream 10.0kb downstream 13447 true scaffold02931: 337557-351003 Cucumis sativus
Cucsa.300770 10.0kb downstream 10.0kb downstream 10000 false scaffold02931: 337557-347556 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305408 5265 Fabidae View MSA
124073160 5270 Rosid View MSA
123746904 5271 Pentapetalae View MSA
122797267 5272 Eudicot View MSA
122046124 5273 Angiosperm View MSA
121349272 5274 Embryophyte View MSA
123425467 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain