Gene : Cucsa.301730 C. sativus v1.0
Defline:  (1 of 6) PF05703 - Auxin canalisation (Auxin_canalis) Genomic Order:  4
Name:  ? Cucsa.301730 Secondary Identifier:  ? PAC:16975649
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.301730 0.5kb upstream 0.5kb upstream 3079 true scaffold02951: 26401-29479 Cucumis sativus
Cucsa.301730 0.5kb upstream 0.5kb upstream 500 false scaffold02951: 28980-29479 Cucumis sativus
Cucsa.301730 0.5kb downstream 0.5kb downstream 3079 true scaffold02951: 25901-28979 Cucumis sativus
Cucsa.301730 0.5kb downstream 0.5kb downstream 500 false scaffold02951: 25901-26400 Cucumis sativus
Cucsa.301730 1.0kb upstream 1.0kb upstream 3579 true scaffold02951: 26401-29979 Cucumis sativus
Cucsa.301730 1.0kb upstream 1.0kb upstream 1000 false scaffold02951: 28980-29979 Cucumis sativus
Cucsa.301730 1.0kb downstream 1.0kb downstream 3579 true scaffold02951: 25401-28979 Cucumis sativus
Cucsa.301730 1.0kb downstream 1.0kb downstream 1000 false scaffold02951: 25401-26400 Cucumis sativus
Cucsa.301730 2.0kb upstream 2.0kb upstream 4579 true scaffold02951: 26401-30979 Cucumis sativus
Cucsa.301730 2.0kb upstream 2.0kb upstream 2000 false scaffold02951: 28980-30979 Cucumis sativus
Cucsa.301730 2.0kb downstream 2.0kb downstream 4579 true scaffold02951: 24401-28979 Cucumis sativus
Cucsa.301730 2.0kb downstream 2.0kb downstream 2000 false scaffold02951: 24401-26400 Cucumis sativus
Cucsa.301730 5.0kb upstream 5.0kb upstream 7579 true scaffold02951: 26401-33979 Cucumis sativus
Cucsa.301730 5.0kb upstream 5.0kb upstream 5000 false scaffold02951: 28980-33979 Cucumis sativus
Cucsa.301730 5.0kb downstream 5.0kb downstream 7579 true scaffold02951: 21401-28979 Cucumis sativus
Cucsa.301730 5.0kb downstream 5.0kb downstream 5000 false scaffold02951: 21401-26400 Cucumis sativus
Cucsa.301730 10.0kb upstream 10.0kb upstream 12579 true scaffold02951: 26401-38979 Cucumis sativus
Cucsa.301730 10.0kb upstream 10.0kb upstream 10000 false scaffold02951: 28980-38979 Cucumis sativus
Cucsa.301730 10.0kb downstream 10.0kb downstream 12579 true scaffold02951: 16401-28979 Cucumis sativus
Cucsa.301730 10.0kb downstream 10.0kb downstream 10000 false scaffold02951: 16401-26400 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301283 5265 Fabidae View MSA
124050253 5270 Rosid View MSA
123741992 5271 Pentapetalae View MSA
122794510 5272 Eudicot View MSA
122048590 5273 Angiosperm View MSA
121311030 5274 Embryophyte View MSA
123348384 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain