Gene : Cucsa.302720 C. sativus v1.0
Defline:  (1 of 1) PTHR23138:SF97 - NUCLEAR PORE COMPLEX PROTEIN NUP50 Genomic Order:  103
Name:  ? Cucsa.302720 Secondary Identifier:  ? PAC:16975792
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.302720 0.5kb upstream 0.5kb upstream 5600 true scaffold02951: 825969-831568 Cucumis sativus
Cucsa.302720 0.5kb upstream 0.5kb upstream 500 false scaffold02951: 831069-831568 Cucumis sativus
Cucsa.302720 0.5kb downstream 0.5kb downstream 5600 true scaffold02951: 825469-831068 Cucumis sativus
Cucsa.302720 0.5kb downstream 0.5kb downstream 500 false scaffold02951: 825469-825968 Cucumis sativus
Cucsa.302720 1.0kb upstream 1.0kb upstream 6100 true scaffold02951: 825969-832068 Cucumis sativus
Cucsa.302720 1.0kb upstream 1.0kb upstream 1000 false scaffold02951: 831069-832068 Cucumis sativus
Cucsa.302720 1.0kb downstream 1.0kb downstream 6100 true scaffold02951: 824969-831068 Cucumis sativus
Cucsa.302720 1.0kb downstream 1.0kb downstream 1000 false scaffold02951: 824969-825968 Cucumis sativus
Cucsa.302720 2.0kb upstream 2.0kb upstream 7100 true scaffold02951: 825969-833068 Cucumis sativus
Cucsa.302720 2.0kb upstream 2.0kb upstream 2000 false scaffold02951: 831069-833068 Cucumis sativus
Cucsa.302720 2.0kb downstream 2.0kb downstream 7100 true scaffold02951: 823969-831068 Cucumis sativus
Cucsa.302720 2.0kb downstream 2.0kb downstream 2000 false scaffold02951: 823969-825968 Cucumis sativus
Cucsa.302720 5.0kb upstream 5.0kb upstream 10100 true scaffold02951: 825969-836068 Cucumis sativus
Cucsa.302720 5.0kb upstream 5.0kb upstream 5000 false scaffold02951: 831069-836068 Cucumis sativus
Cucsa.302720 5.0kb downstream 5.0kb downstream 10100 true scaffold02951: 820969-831068 Cucumis sativus
Cucsa.302720 5.0kb downstream 5.0kb downstream 5000 false scaffold02951: 820969-825968 Cucumis sativus
Cucsa.302720 10.0kb upstream 10.0kb upstream 15100 true scaffold02951: 825969-841068 Cucumis sativus
Cucsa.302720 10.0kb upstream 10.0kb upstream 10000 false scaffold02951: 831069-841068 Cucumis sativus
Cucsa.302720 10.0kb downstream 10.0kb downstream 15100 true scaffold02951: 815969-831068 Cucumis sativus
Cucsa.302720 10.0kb downstream 10.0kb downstream 10000 false scaffold02951: 815969-825968 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605153 5273 Angiosperm Singleton cluster - no MSA
122235417 5265 Fabidae Singleton cluster - no MSA
123981632 5270 Rosid Singleton cluster - no MSA
123557307 5271 Pentapetalae Singleton cluster - no MSA
122592121 5272 Eudicot Singleton cluster - no MSA
120877443 5274 Embryophyte Singleton cluster - no MSA
122918332 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain