Gene : Cucsa.307090 C. sativus v1.0
Defline:  (1 of 1) PTHR10896:SF16 - BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED Genomic Order:  67
Name:  ? Cucsa.307090 Secondary Identifier:  ? PAC:16976163
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5800 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.307090 0.5kb upstream 0.5kb upstream 3254 true scaffold02977: 385982-389235 Cucumis sativus
Cucsa.307090 0.5kb upstream 0.5kb upstream 500 false scaffold02977: 385982-386481 Cucumis sativus
Cucsa.307090 0.5kb downstream 0.5kb downstream 3254 true scaffold02977: 386482-389735 Cucumis sativus
Cucsa.307090 0.5kb downstream 0.5kb downstream 500 false scaffold02977: 389236-389735 Cucumis sativus
Cucsa.307090 1.0kb upstream 1.0kb upstream 3754 true scaffold02977: 385482-389235 Cucumis sativus
Cucsa.307090 1.0kb upstream 1.0kb upstream 1000 false scaffold02977: 385482-386481 Cucumis sativus
Cucsa.307090 1.0kb downstream 1.0kb downstream 3754 true scaffold02977: 386482-390235 Cucumis sativus
Cucsa.307090 1.0kb downstream 1.0kb downstream 1000 false scaffold02977: 389236-390235 Cucumis sativus
Cucsa.307090 2.0kb upstream 2.0kb upstream 4754 true scaffold02977: 384482-389235 Cucumis sativus
Cucsa.307090 2.0kb upstream 2.0kb upstream 2000 false scaffold02977: 384482-386481 Cucumis sativus
Cucsa.307090 2.0kb downstream 2.0kb downstream 4754 true scaffold02977: 386482-391235 Cucumis sativus
Cucsa.307090 2.0kb downstream 2.0kb downstream 2000 false scaffold02977: 389236-391235 Cucumis sativus
Cucsa.307090 5.0kb upstream 5.0kb upstream 7754 true scaffold02977: 381482-389235 Cucumis sativus
Cucsa.307090 5.0kb upstream 5.0kb upstream 5000 false scaffold02977: 381482-386481 Cucumis sativus
Cucsa.307090 5.0kb downstream 5.0kb downstream 7754 true scaffold02977: 386482-394235 Cucumis sativus
Cucsa.307090 5.0kb downstream 5.0kb downstream 5000 false scaffold02977: 389236-394235 Cucumis sativus
Cucsa.307090 10.0kb upstream 10.0kb upstream 12754 true scaffold02977: 376482-389235 Cucumis sativus
Cucsa.307090 10.0kb upstream 10.0kb upstream 10000 false scaffold02977: 376482-386481 Cucumis sativus
Cucsa.307090 10.0kb downstream 10.0kb downstream 12754 true scaffold02977: 386482-399235 Cucumis sativus
Cucsa.307090 10.0kb downstream 10.0kb downstream 10000 false scaffold02977: 389236-399235 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040902 5273 Angiosperm View MSA
122301883 5265 Fabidae View MSA
124062732 5270 Rosid View MSA
123736974 5271 Pentapetalae View MSA
122787531 5272 Eudicot View MSA
121309764 5274 Embryophyte View MSA
123347429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain