Gene : Cucsa.308410 C. sativus v1.0
Defline:  (1 of 2) PTHR21049 - RIBOPHORIN I Genomic Order:  67
Name:  ? Cucsa.308410 Secondary Identifier:  ? PAC:16976347
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.308410 0.5kb upstream 0.5kb upstream 4537 true scaffold02978: 546758-551294 Cucumis sativus
Cucsa.308410 0.5kb upstream 0.5kb upstream 500 false scaffold02978: 550795-551294 Cucumis sativus
Cucsa.308410 0.5kb downstream 0.5kb downstream 4537 true scaffold02978: 546258-550794 Cucumis sativus
Cucsa.308410 0.5kb downstream 0.5kb downstream 500 false scaffold02978: 546258-546757 Cucumis sativus
Cucsa.308410 1.0kb upstream 1.0kb upstream 5037 true scaffold02978: 546758-551794 Cucumis sativus
Cucsa.308410 1.0kb upstream 1.0kb upstream 1000 false scaffold02978: 550795-551794 Cucumis sativus
Cucsa.308410 1.0kb downstream 1.0kb downstream 5037 true scaffold02978: 545758-550794 Cucumis sativus
Cucsa.308410 1.0kb downstream 1.0kb downstream 1000 false scaffold02978: 545758-546757 Cucumis sativus
Cucsa.308410 2.0kb upstream 2.0kb upstream 6037 true scaffold02978: 546758-552794 Cucumis sativus
Cucsa.308410 2.0kb upstream 2.0kb upstream 2000 false scaffold02978: 550795-552794 Cucumis sativus
Cucsa.308410 2.0kb downstream 2.0kb downstream 6037 true scaffold02978: 544758-550794 Cucumis sativus
Cucsa.308410 2.0kb downstream 2.0kb downstream 2000 false scaffold02978: 544758-546757 Cucumis sativus
Cucsa.308410 5.0kb upstream 5.0kb upstream 9037 true scaffold02978: 546758-555794 Cucumis sativus
Cucsa.308410 5.0kb upstream 5.0kb upstream 5000 false scaffold02978: 550795-555794 Cucumis sativus
Cucsa.308410 5.0kb downstream 5.0kb downstream 9037 true scaffold02978: 541758-550794 Cucumis sativus
Cucsa.308410 5.0kb downstream 5.0kb downstream 5000 false scaffold02978: 541758-546757 Cucumis sativus
Cucsa.308410 10.0kb upstream 10.0kb upstream 14037 true scaffold02978: 546758-560794 Cucumis sativus
Cucsa.308410 10.0kb upstream 10.0kb upstream 10000 false scaffold02978: 550795-560794 Cucumis sativus
Cucsa.308410 10.0kb downstream 10.0kb downstream 14037 true scaffold02978: 536758-550794 Cucumis sativus
Cucsa.308410 10.0kb downstream 10.0kb downstream 10000 false scaffold02978: 536758-546757 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303975 5265 Fabidae View MSA
124062432 5270 Rosid View MSA
123739832 5271 Pentapetalae View MSA
122788147 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain