Gene : Cucsa.308590 C. sativus v1.0
Defline:  (1 of 2) PTHR12411//PTHR12411:SF342 - CYSTEINE PROTEASE FAMILY C1-RELATED Genomic Order:  85
Name:  ? Cucsa.308590 Secondary Identifier:  ? PAC:16976378
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.308590 0.5kb upstream 0.5kb upstream 5683 true scaffold02978: 646849-652531 Cucumis sativus
Cucsa.308590 0.5kb upstream 0.5kb upstream 500 false scaffold02978: 652032-652531 Cucumis sativus
Cucsa.308590 0.5kb downstream 0.5kb downstream 5683 true scaffold02978: 646349-652031 Cucumis sativus
Cucsa.308590 0.5kb downstream 0.5kb downstream 500 false scaffold02978: 646349-646848 Cucumis sativus
Cucsa.308590 1.0kb upstream 1.0kb upstream 6183 true scaffold02978: 646849-653031 Cucumis sativus
Cucsa.308590 1.0kb upstream 1.0kb upstream 1000 false scaffold02978: 652032-653031 Cucumis sativus
Cucsa.308590 1.0kb downstream 1.0kb downstream 6183 true scaffold02978: 645849-652031 Cucumis sativus
Cucsa.308590 1.0kb downstream 1.0kb downstream 1000 false scaffold02978: 645849-646848 Cucumis sativus
Cucsa.308590 2.0kb upstream 2.0kb upstream 7183 true scaffold02978: 646849-654031 Cucumis sativus
Cucsa.308590 2.0kb upstream 2.0kb upstream 2000 false scaffold02978: 652032-654031 Cucumis sativus
Cucsa.308590 2.0kb downstream 2.0kb downstream 7183 true scaffold02978: 644849-652031 Cucumis sativus
Cucsa.308590 2.0kb downstream 2.0kb downstream 2000 false scaffold02978: 644849-646848 Cucumis sativus
Cucsa.308590 5.0kb upstream 5.0kb upstream 10183 true scaffold02978: 646849-657031 Cucumis sativus
Cucsa.308590 5.0kb upstream 5.0kb upstream 5000 false scaffold02978: 652032-657031 Cucumis sativus
Cucsa.308590 5.0kb downstream 5.0kb downstream 10183 true scaffold02978: 641849-652031 Cucumis sativus
Cucsa.308590 5.0kb downstream 5.0kb downstream 5000 false scaffold02978: 641849-646848 Cucumis sativus
Cucsa.308590 10.0kb upstream 10.0kb upstream 15183 true scaffold02978: 646849-662031 Cucumis sativus
Cucsa.308590 10.0kb upstream 10.0kb upstream 10000 false scaffold02978: 652032-662031 Cucumis sativus
Cucsa.308590 10.0kb downstream 10.0kb downstream 15183 true scaffold02978: 636849-652031 Cucumis sativus
Cucsa.308590 10.0kb downstream 10.0kb downstream 10000 false scaffold02978: 636849-646848 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605234 5273 Angiosperm Singleton cluster - no MSA
122235498 5265 Fabidae Singleton cluster - no MSA
123981713 5270 Rosid Singleton cluster - no MSA
123557388 5271 Pentapetalae Singleton cluster - no MSA
122592202 5272 Eudicot Singleton cluster - no MSA
120877524 5274 Embryophyte Singleton cluster - no MSA
122918413 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain