Gene : Cucsa.310780 C. sativus v1.0
Defline:  (1 of 2) 6.1.1.12 - Aspartate--tRNA ligase / Aspartyl-tRNA synthetase Genomic Order:  69
Name:  ? Cucsa.310780 Secondary Identifier:  ? PAC:16976582
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.310780 0.5kb upstream 0.5kb upstream 4017 true scaffold02995: 533790-537806 Cucumis sativus
Cucsa.310780 0.5kb upstream 0.5kb upstream 500 false scaffold02995: 533790-534289 Cucumis sativus
Cucsa.310780 0.5kb downstream 0.5kb downstream 4017 true scaffold02995: 534290-538306 Cucumis sativus
Cucsa.310780 0.5kb downstream 0.5kb downstream 500 false scaffold02995: 537807-538306 Cucumis sativus
Cucsa.310780 1.0kb upstream 1.0kb upstream 4517 true scaffold02995: 533290-537806 Cucumis sativus
Cucsa.310780 1.0kb upstream 1.0kb upstream 1000 false scaffold02995: 533290-534289 Cucumis sativus
Cucsa.310780 1.0kb downstream 1.0kb downstream 4517 true scaffold02995: 534290-538806 Cucumis sativus
Cucsa.310780 1.0kb downstream 1.0kb downstream 1000 false scaffold02995: 537807-538806 Cucumis sativus
Cucsa.310780 2.0kb upstream 2.0kb upstream 5517 true scaffold02995: 532290-537806 Cucumis sativus
Cucsa.310780 2.0kb upstream 2.0kb upstream 2000 false scaffold02995: 532290-534289 Cucumis sativus
Cucsa.310780 2.0kb downstream 2.0kb downstream 5517 true scaffold02995: 534290-539806 Cucumis sativus
Cucsa.310780 2.0kb downstream 2.0kb downstream 2000 false scaffold02995: 537807-539806 Cucumis sativus
Cucsa.310780 5.0kb upstream 5.0kb upstream 8517 true scaffold02995: 529290-537806 Cucumis sativus
Cucsa.310780 5.0kb upstream 5.0kb upstream 5000 false scaffold02995: 529290-534289 Cucumis sativus
Cucsa.310780 5.0kb downstream 5.0kb downstream 8517 true scaffold02995: 534290-542806 Cucumis sativus
Cucsa.310780 5.0kb downstream 5.0kb downstream 5000 false scaffold02995: 537807-542806 Cucumis sativus
Cucsa.310780 10.0kb upstream 10.0kb upstream 13517 true scaffold02995: 524290-537806 Cucumis sativus
Cucsa.310780 10.0kb upstream 10.0kb upstream 10000 false scaffold02995: 524290-534289 Cucumis sativus
Cucsa.310780 10.0kb downstream 10.0kb downstream 13517 true scaffold02995: 534290-547806 Cucumis sativus
Cucsa.310780 10.0kb downstream 10.0kb downstream 10000 false scaffold02995: 537807-547806 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299844 5265 Fabidae View MSA
124066804 5270 Rosid View MSA
123746132 5271 Pentapetalae View MSA
122792438 5272 Eudicot View MSA
122047949 5273 Angiosperm View MSA
121349506 5274 Embryophyte View MSA
123428007 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain