Gene : Cucsa.311200 C. sativus v1.0
Defline:  (1 of 2) PTHR12192//PTHR12192:SF10 - CATION TRANSPORT PROTEIN CHAC-RELATED Genomic Order:  111
Name:  ? Cucsa.311200 Secondary Identifier:  ? PAC:16976647
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.311200 0.5kb upstream 0.5kb upstream 3593 true scaffold02995: 853677-857269 Cucumis sativus
Cucsa.311200 0.5kb upstream 0.5kb upstream 500 false scaffold02995: 853677-854176 Cucumis sativus
Cucsa.311200 0.5kb downstream 0.5kb downstream 3593 true scaffold02995: 854177-857769 Cucumis sativus
Cucsa.311200 0.5kb downstream 0.5kb downstream 500 false scaffold02995: 857270-857769 Cucumis sativus
Cucsa.311200 1.0kb upstream 1.0kb upstream 4093 true scaffold02995: 853177-857269 Cucumis sativus
Cucsa.311200 1.0kb upstream 1.0kb upstream 1000 false scaffold02995: 853177-854176 Cucumis sativus
Cucsa.311200 1.0kb downstream 1.0kb downstream 4093 true scaffold02995: 854177-858269 Cucumis sativus
Cucsa.311200 1.0kb downstream 1.0kb downstream 1000 false scaffold02995: 857270-858269 Cucumis sativus
Cucsa.311200 2.0kb upstream 2.0kb upstream 5093 true scaffold02995: 852177-857269 Cucumis sativus
Cucsa.311200 2.0kb upstream 2.0kb upstream 2000 false scaffold02995: 852177-854176 Cucumis sativus
Cucsa.311200 2.0kb downstream 2.0kb downstream 5093 true scaffold02995: 854177-859269 Cucumis sativus
Cucsa.311200 2.0kb downstream 2.0kb downstream 2000 false scaffold02995: 857270-859269 Cucumis sativus
Cucsa.311200 5.0kb upstream 5.0kb upstream 8093 true scaffold02995: 849177-857269 Cucumis sativus
Cucsa.311200 5.0kb upstream 5.0kb upstream 5000 false scaffold02995: 849177-854176 Cucumis sativus
Cucsa.311200 5.0kb downstream 5.0kb downstream 8093 true scaffold02995: 854177-862269 Cucumis sativus
Cucsa.311200 5.0kb downstream 5.0kb downstream 5000 false scaffold02995: 857270-862269 Cucumis sativus
Cucsa.311200 10.0kb upstream 10.0kb upstream 13093 true scaffold02995: 844177-857269 Cucumis sativus
Cucsa.311200 10.0kb upstream 10.0kb upstream 10000 false scaffold02995: 844177-854176 Cucumis sativus
Cucsa.311200 10.0kb downstream 10.0kb downstream 13093 true scaffold02995: 854177-867269 Cucumis sativus
Cucsa.311200 10.0kb downstream 10.0kb downstream 10000 false scaffold02995: 857270-867269 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299413 5265 Fabidae View MSA
124064696 5270 Rosid View MSA
123751581 5271 Pentapetalae View MSA
122789241 5272 Eudicot View MSA
122047820 5273 Angiosperm View MSA
121346610 5274 Embryophyte View MSA
123426702 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain