Gene : Cucsa.311880 C. sativus v1.0
Defline:  (1 of 2) PTHR31100:SF1 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 17-RELATED Genomic Order:  179
Name:  ? Cucsa.311880 Secondary Identifier:  ? PAC:16976763
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.311880 0.5kb upstream 0.5kb upstream 1377 true scaffold02995: 1400280-1401656 Cucumis sativus
Cucsa.311880 0.5kb upstream 0.5kb upstream 500 false scaffold02995: 1401157-1401656 Cucumis sativus
Cucsa.311880 0.5kb downstream 0.5kb downstream 1377 true scaffold02995: 1399780-1401156 Cucumis sativus
Cucsa.311880 0.5kb downstream 0.5kb downstream 500 false scaffold02995: 1399780-1400279 Cucumis sativus
Cucsa.311880 1.0kb upstream 1.0kb upstream 1877 true scaffold02995: 1400280-1402156 Cucumis sativus
Cucsa.311880 1.0kb upstream 1.0kb upstream 1000 false scaffold02995: 1401157-1402156 Cucumis sativus
Cucsa.311880 1.0kb downstream 1.0kb downstream 1877 true scaffold02995: 1399280-1401156 Cucumis sativus
Cucsa.311880 1.0kb downstream 1.0kb downstream 1000 false scaffold02995: 1399280-1400279 Cucumis sativus
Cucsa.311880 2.0kb upstream 2.0kb upstream 2877 true scaffold02995: 1400280-1403156 Cucumis sativus
Cucsa.311880 2.0kb upstream 2.0kb upstream 2000 false scaffold02995: 1401157-1403156 Cucumis sativus
Cucsa.311880 2.0kb downstream 2.0kb downstream 2877 true scaffold02995: 1398280-1401156 Cucumis sativus
Cucsa.311880 2.0kb downstream 2.0kb downstream 2000 false scaffold02995: 1398280-1400279 Cucumis sativus
Cucsa.311880 5.0kb upstream 5.0kb upstream 5877 true scaffold02995: 1400280-1406156 Cucumis sativus
Cucsa.311880 5.0kb upstream 5.0kb upstream 5000 false scaffold02995: 1401157-1406156 Cucumis sativus
Cucsa.311880 5.0kb downstream 5.0kb downstream 5877 true scaffold02995: 1395280-1401156 Cucumis sativus
Cucsa.311880 5.0kb downstream 5.0kb downstream 5000 false scaffold02995: 1395280-1400279 Cucumis sativus
Cucsa.311880 10.0kb upstream 10.0kb upstream 10877 true scaffold02995: 1400280-1411156 Cucumis sativus
Cucsa.311880 10.0kb upstream 10.0kb upstream 10000 false scaffold02995: 1401157-1411156 Cucumis sativus
Cucsa.311880 10.0kb downstream 10.0kb downstream 10877 true scaffold02995: 1390280-1401156 Cucumis sativus
Cucsa.311880 10.0kb downstream 10.0kb downstream 10000 false scaffold02995: 1390280-1400279 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304898 5265 Fabidae View MSA
124070322 5270 Rosid View MSA
123746080 5271 Pentapetalae View MSA
122793213 5272 Eudicot View MSA
122046470 5273 Angiosperm View MSA
121310610 5274 Embryophyte View MSA
123348051 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain