Gene : Cucsa.312470 C. sativus v1.0
Defline:  (1 of 2) 6.1.1.2 - Tryptophan--tRNA ligase / Tryptophanyl-tRNA synthetase Genomic Order:  232
Name:  ? Cucsa.312470 Secondary Identifier:  ? PAC:16976847
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.312470 0.5kb upstream 0.5kb upstream 8332 true scaffold02995: 1860552-1868883 Cucumis sativus
Cucsa.312470 0.5kb upstream 0.5kb upstream 500 false scaffold02995: 1868384-1868883 Cucumis sativus
Cucsa.312470 0.5kb downstream 0.5kb downstream 8332 true scaffold02995: 1860052-1868383 Cucumis sativus
Cucsa.312470 0.5kb downstream 0.5kb downstream 500 false scaffold02995: 1860052-1860551 Cucumis sativus
Cucsa.312470 1.0kb upstream 1.0kb upstream 8832 true scaffold02995: 1860552-1869383 Cucumis sativus
Cucsa.312470 1.0kb upstream 1.0kb upstream 1000 false scaffold02995: 1868384-1869383 Cucumis sativus
Cucsa.312470 1.0kb downstream 1.0kb downstream 8832 true scaffold02995: 1859552-1868383 Cucumis sativus
Cucsa.312470 1.0kb downstream 1.0kb downstream 1000 false scaffold02995: 1859552-1860551 Cucumis sativus
Cucsa.312470 2.0kb upstream 2.0kb upstream 9832 true scaffold02995: 1860552-1870383 Cucumis sativus
Cucsa.312470 2.0kb upstream 2.0kb upstream 2000 false scaffold02995: 1868384-1870383 Cucumis sativus
Cucsa.312470 2.0kb downstream 2.0kb downstream 9832 true scaffold02995: 1858552-1868383 Cucumis sativus
Cucsa.312470 2.0kb downstream 2.0kb downstream 2000 false scaffold02995: 1858552-1860551 Cucumis sativus
Cucsa.312470 5.0kb upstream 5.0kb upstream 12832 true scaffold02995: 1860552-1873383 Cucumis sativus
Cucsa.312470 5.0kb upstream 5.0kb upstream 5000 false scaffold02995: 1868384-1873383 Cucumis sativus
Cucsa.312470 5.0kb downstream 5.0kb downstream 12832 true scaffold02995: 1855552-1868383 Cucumis sativus
Cucsa.312470 5.0kb downstream 5.0kb downstream 5000 false scaffold02995: 1855552-1860551 Cucumis sativus
Cucsa.312470 10.0kb upstream 10.0kb upstream 17832 true scaffold02995: 1860552-1878383 Cucumis sativus
Cucsa.312470 10.0kb upstream 10.0kb upstream 10000 false scaffold02995: 1868384-1878383 Cucumis sativus
Cucsa.312470 10.0kb downstream 10.0kb downstream 17832 true scaffold02995: 1850552-1868383 Cucumis sativus
Cucsa.312470 10.0kb downstream 10.0kb downstream 10000 false scaffold02995: 1850552-1860551 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308999 5265 Fabidae View MSA
124063283 5270 Rosid View MSA
123736955 5271 Pentapetalae View MSA
122787950 5272 Eudicot View MSA
122047133 5273 Angiosperm View MSA
121345289 5274 Embryophyte View MSA
123423978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain