Gene : Cucsa.312580 C. sativus v1.0
Defline:  (1 of 1) PTHR10543//PTHR10543:SF30 - BETA-CAROTENE DIOXYGENASE Genomic Order:  243
Name:  ? Cucsa.312580 Secondary Identifier:  ? PAC:16976873
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-695 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.312580 0.5kb upstream 0.5kb upstream 4691 true scaffold02995: 1949379-1954069 Cucumis sativus
Cucsa.312580 0.5kb upstream 0.5kb upstream 500 false scaffold02995: 1949379-1949878 Cucumis sativus
Cucsa.312580 0.5kb downstream 0.5kb downstream 4691 true scaffold02995: 1949879-1954569 Cucumis sativus
Cucsa.312580 0.5kb downstream 0.5kb downstream 500 false scaffold02995: 1954070-1954569 Cucumis sativus
Cucsa.312580 1.0kb upstream 1.0kb upstream 5191 true scaffold02995: 1948879-1954069 Cucumis sativus
Cucsa.312580 1.0kb upstream 1.0kb upstream 1000 false scaffold02995: 1948879-1949878 Cucumis sativus
Cucsa.312580 1.0kb downstream 1.0kb downstream 5191 true scaffold02995: 1949879-1955069 Cucumis sativus
Cucsa.312580 1.0kb downstream 1.0kb downstream 1000 false scaffold02995: 1954070-1955069 Cucumis sativus
Cucsa.312580 2.0kb upstream 2.0kb upstream 6191 true scaffold02995: 1947879-1954069 Cucumis sativus
Cucsa.312580 2.0kb upstream 2.0kb upstream 2000 false scaffold02995: 1947879-1949878 Cucumis sativus
Cucsa.312580 2.0kb downstream 2.0kb downstream 6191 true scaffold02995: 1949879-1956069 Cucumis sativus
Cucsa.312580 2.0kb downstream 2.0kb downstream 2000 false scaffold02995: 1954070-1956069 Cucumis sativus
Cucsa.312580 5.0kb upstream 5.0kb upstream 9191 true scaffold02995: 1944879-1954069 Cucumis sativus
Cucsa.312580 5.0kb upstream 5.0kb upstream 5000 false scaffold02995: 1944879-1949878 Cucumis sativus
Cucsa.312580 5.0kb downstream 5.0kb downstream 9191 true scaffold02995: 1949879-1959069 Cucumis sativus
Cucsa.312580 5.0kb downstream 5.0kb downstream 5000 false scaffold02995: 1954070-1959069 Cucumis sativus
Cucsa.312580 10.0kb upstream 10.0kb upstream 14191 true scaffold02995: 1939879-1954069 Cucumis sativus
Cucsa.312580 10.0kb upstream 10.0kb upstream 10000 false scaffold02995: 1939879-1949878 Cucumis sativus
Cucsa.312580 10.0kb downstream 10.0kb downstream 14191 true scaffold02995: 1949879-1964069 Cucumis sativus
Cucsa.312580 10.0kb downstream 10.0kb downstream 10000 false scaffold02995: 1954070-1964069 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302721 5265 Fabidae View MSA
124074147 5270 Rosid View MSA
123748697 5271 Pentapetalae View MSA
122795171 5272 Eudicot View MSA
122051607 5273 Angiosperm View MSA
121349725 5274 Embryophyte View MSA
123381417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain