Gene : Cucsa.334730 C. sativus v1.0
Defline:  (1 of 1) PF14493 - Helix-turn-helix domain (HTH_40) Genomic Order:  15
Name:  ? Cucsa.334730 Secondary Identifier:  ? PAC:16978454
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.334730 0.5kb upstream 0.5kb upstream 2314 true scaffold03312: 200204-202517 Cucumis sativus
Cucsa.334730 0.5kb upstream 0.5kb upstream 500 false scaffold03312: 202018-202517 Cucumis sativus
Cucsa.334730 0.5kb downstream 0.5kb downstream 2314 true scaffold03312: 199704-202017 Cucumis sativus
Cucsa.334730 0.5kb downstream 0.5kb downstream 500 false scaffold03312: 199704-200203 Cucumis sativus
Cucsa.334730 1.0kb upstream 1.0kb upstream 2814 true scaffold03312: 200204-203017 Cucumis sativus
Cucsa.334730 1.0kb upstream 1.0kb upstream 1000 false scaffold03312: 202018-203017 Cucumis sativus
Cucsa.334730 1.0kb downstream 1.0kb downstream 2814 true scaffold03312: 199204-202017 Cucumis sativus
Cucsa.334730 1.0kb downstream 1.0kb downstream 1000 false scaffold03312: 199204-200203 Cucumis sativus
Cucsa.334730 2.0kb upstream 2.0kb upstream 3814 true scaffold03312: 200204-204017 Cucumis sativus
Cucsa.334730 2.0kb upstream 2.0kb upstream 2000 false scaffold03312: 202018-204017 Cucumis sativus
Cucsa.334730 2.0kb downstream 2.0kb downstream 3814 true scaffold03312: 198204-202017 Cucumis sativus
Cucsa.334730 2.0kb downstream 2.0kb downstream 2000 false scaffold03312: 198204-200203 Cucumis sativus
Cucsa.334730 5.0kb upstream 5.0kb upstream 6814 true scaffold03312: 200204-207017 Cucumis sativus
Cucsa.334730 5.0kb upstream 5.0kb upstream 5000 false scaffold03312: 202018-207017 Cucumis sativus
Cucsa.334730 5.0kb downstream 5.0kb downstream 6814 true scaffold03312: 195204-202017 Cucumis sativus
Cucsa.334730 5.0kb downstream 5.0kb downstream 5000 false scaffold03312: 195204-200203 Cucumis sativus
Cucsa.334730 10.0kb upstream 10.0kb upstream 11814 true scaffold03312: 200204-212017 Cucumis sativus
Cucsa.334730 10.0kb upstream 10.0kb upstream 10000 false scaffold03312: 202018-212017 Cucumis sativus
Cucsa.334730 10.0kb downstream 10.0kb downstream 11814 true scaffold03312: 190204-202017 Cucumis sativus
Cucsa.334730 10.0kb downstream 10.0kb downstream 10000 false scaffold03312: 190204-200203 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780696 5273 Angiosperm View MSA
122237239 5265 Fabidae View MSA
124074587 5270 Rosid View MSA
123747571 5271 Pentapetalae View MSA
122772214 5272 Eudicot View MSA
121348540 5274 Embryophyte View MSA
123380905 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain