Gene : Cucsa.348520 C. sativus v1.0
Defline:  (1 of 4) PF01117 - Aerolysin toxin (Aerolysin) Genomic Order:  1
Name:  ? Cucsa.348520 Secondary Identifier:  ? PAC:16979619
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.348520 0.5kb upstream 0.5kb upstream 1937 true scaffold03487: 2081-4017 Cucumis sativus
Cucsa.348520 0.5kb upstream 0.5kb upstream 500 false scaffold03487: 2081-2580 Cucumis sativus
Cucsa.348520 0.5kb downstream 0.5kb downstream 1937 true scaffold03487: 2581-4517 Cucumis sativus
Cucsa.348520 0.5kb downstream 0.5kb downstream 500 false scaffold03487: 4018-4517 Cucumis sativus
Cucsa.348520 1.0kb upstream 1.0kb upstream 2437 true scaffold03487: 1581-4017 Cucumis sativus
Cucsa.348520 1.0kb upstream 1.0kb upstream 1000 false scaffold03487: 1581-2580 Cucumis sativus
Cucsa.348520 1.0kb downstream 1.0kb downstream 2437 true scaffold03487: 2581-5017 Cucumis sativus
Cucsa.348520 1.0kb downstream 1.0kb downstream 1000 false scaffold03487: 4018-5017 Cucumis sativus
Cucsa.348520 2.0kb upstream 2.0kb upstream 3437 true scaffold03487: 581-4017 Cucumis sativus
Cucsa.348520 2.0kb upstream 2.0kb upstream 2000 false scaffold03487: 581-2580 Cucumis sativus
Cucsa.348520 2.0kb downstream 2.0kb downstream 3437 true scaffold03487: 2581-6017 Cucumis sativus
Cucsa.348520 2.0kb downstream 2.0kb downstream 2000 false scaffold03487: 4018-6017 Cucumis sativus
Cucsa.348520 5.0kb upstream 5.0kb upstream 4017 true scaffold03487: 1-4017 Cucumis sativus
Cucsa.348520 5.0kb upstream 5.0kb upstream 2580 false scaffold03487: 1-2580 Cucumis sativus
Cucsa.348520 5.0kb downstream 5.0kb downstream 6437 true scaffold03487: 2581-9017 Cucumis sativus
Cucsa.348520 5.0kb downstream 5.0kb downstream 5000 false scaffold03487: 4018-9017 Cucumis sativus
Cucsa.348520 10.0kb upstream 10.0kb upstream 4017 true scaffold03487: 1-4017 Cucumis sativus
Cucsa.348520 10.0kb upstream 10.0kb upstream 2580 false scaffold03487: 1-2580 Cucumis sativus
Cucsa.348520 10.0kb downstream 10.0kb downstream 11437 true scaffold03487: 2581-14017 Cucumis sativus
Cucsa.348520 10.0kb downstream 10.0kb downstream 10000 false scaffold03487: 4018-14017 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029421 5273 Angiosperm View MSA
122236927 5265 Fabidae View MSA
124072797 5270 Rosid View MSA
123745927 5271 Pentapetalae View MSA
122794125 5272 Eudicot View MSA
121348691 5274 Embryophyte View MSA
123380974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain