Gene : Cucsa.348770 C. sativus v1.0
Defline:  (1 of 1) PTHR12858:SF1 - PRE-RRNA-PROCESSING PROTEIN TSR1 HOMOLOG Genomic Order:  26
Name:  ? Cucsa.348770 Secondary Identifier:  ? PAC:16979655
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.348770 0.5kb upstream 0.5kb upstream 9640 true scaffold03487: 215136-224775 Cucumis sativus
Cucsa.348770 0.5kb upstream 0.5kb upstream 500 false scaffold03487: 224276-224775 Cucumis sativus
Cucsa.348770 0.5kb downstream 0.5kb downstream 9640 true scaffold03487: 214636-224275 Cucumis sativus
Cucsa.348770 0.5kb downstream 0.5kb downstream 500 false scaffold03487: 214636-215135 Cucumis sativus
Cucsa.348770 1.0kb upstream 1.0kb upstream 10140 true scaffold03487: 215136-225275 Cucumis sativus
Cucsa.348770 1.0kb upstream 1.0kb upstream 1000 false scaffold03487: 224276-225275 Cucumis sativus
Cucsa.348770 1.0kb downstream 1.0kb downstream 10140 true scaffold03487: 214136-224275 Cucumis sativus
Cucsa.348770 1.0kb downstream 1.0kb downstream 1000 false scaffold03487: 214136-215135 Cucumis sativus
Cucsa.348770 2.0kb upstream 2.0kb upstream 11140 true scaffold03487: 215136-226275 Cucumis sativus
Cucsa.348770 2.0kb upstream 2.0kb upstream 2000 false scaffold03487: 224276-226275 Cucumis sativus
Cucsa.348770 2.0kb downstream 2.0kb downstream 11140 true scaffold03487: 213136-224275 Cucumis sativus
Cucsa.348770 2.0kb downstream 2.0kb downstream 2000 false scaffold03487: 213136-215135 Cucumis sativus
Cucsa.348770 5.0kb upstream 5.0kb upstream 14140 true scaffold03487: 215136-229275 Cucumis sativus
Cucsa.348770 5.0kb upstream 5.0kb upstream 5000 false scaffold03487: 224276-229275 Cucumis sativus
Cucsa.348770 5.0kb downstream 5.0kb downstream 14140 true scaffold03487: 210136-224275 Cucumis sativus
Cucsa.348770 5.0kb downstream 5.0kb downstream 5000 false scaffold03487: 210136-215135 Cucumis sativus
Cucsa.348770 10.0kb upstream 10.0kb upstream 19140 true scaffold03487: 215136-234275 Cucumis sativus
Cucsa.348770 10.0kb upstream 10.0kb upstream 10000 false scaffold03487: 224276-234275 Cucumis sativus
Cucsa.348770 10.0kb downstream 10.0kb downstream 19140 true scaffold03487: 205136-224275 Cucumis sativus
Cucsa.348770 10.0kb downstream 10.0kb downstream 10000 false scaffold03487: 205136-215135 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299777 5265 Fabidae View MSA
124066682 5270 Rosid View MSA
123739487 5271 Pentapetalae View MSA
122792975 5272 Eudicot View MSA
122044889 5273 Angiosperm View MSA
121347720 5274 Embryophyte View MSA
123428215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain