Gene : Cucsa.348900 C. sativus v1.0
Defline:  (1 of 1) PTHR17204:SF5 - PRE-MRNA-PROCESSING FACTOR 39 Genomic Order:  39
Name:  ? Cucsa.348900 Secondary Identifier:  ? PAC:16979678
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.348900 0.5kb upstream 0.5kb upstream 10977 true scaffold03487: 307385-318361 Cucumis sativus
Cucsa.348900 0.5kb upstream 0.5kb upstream 500 false scaffold03487: 317862-318361 Cucumis sativus
Cucsa.348900 0.5kb downstream 0.5kb downstream 10977 true scaffold03487: 306885-317861 Cucumis sativus
Cucsa.348900 0.5kb downstream 0.5kb downstream 500 false scaffold03487: 306885-307384 Cucumis sativus
Cucsa.348900 1.0kb upstream 1.0kb upstream 11477 true scaffold03487: 307385-318861 Cucumis sativus
Cucsa.348900 1.0kb upstream 1.0kb upstream 1000 false scaffold03487: 317862-318861 Cucumis sativus
Cucsa.348900 1.0kb downstream 1.0kb downstream 11477 true scaffold03487: 306385-317861 Cucumis sativus
Cucsa.348900 1.0kb downstream 1.0kb downstream 1000 false scaffold03487: 306385-307384 Cucumis sativus
Cucsa.348900 2.0kb upstream 2.0kb upstream 12477 true scaffold03487: 307385-319861 Cucumis sativus
Cucsa.348900 2.0kb upstream 2.0kb upstream 2000 false scaffold03487: 317862-319861 Cucumis sativus
Cucsa.348900 2.0kb downstream 2.0kb downstream 12477 true scaffold03487: 305385-317861 Cucumis sativus
Cucsa.348900 2.0kb downstream 2.0kb downstream 2000 false scaffold03487: 305385-307384 Cucumis sativus
Cucsa.348900 5.0kb upstream 5.0kb upstream 15477 true scaffold03487: 307385-322861 Cucumis sativus
Cucsa.348900 5.0kb upstream 5.0kb upstream 5000 false scaffold03487: 317862-322861 Cucumis sativus
Cucsa.348900 5.0kb downstream 5.0kb downstream 15477 true scaffold03487: 302385-317861 Cucumis sativus
Cucsa.348900 5.0kb downstream 5.0kb downstream 5000 false scaffold03487: 302385-307384 Cucumis sativus
Cucsa.348900 10.0kb upstream 10.0kb upstream 20477 true scaffold03487: 307385-327861 Cucumis sativus
Cucsa.348900 10.0kb upstream 10.0kb upstream 10000 false scaffold03487: 317862-327861 Cucumis sativus
Cucsa.348900 10.0kb downstream 10.0kb downstream 20477 true scaffold03487: 297385-317861 Cucumis sativus
Cucsa.348900 10.0kb downstream 10.0kb downstream 10000 false scaffold03487: 297385-307384 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305271 5265 Fabidae View MSA
124068897 5270 Rosid View MSA
123746236 5271 Pentapetalae View MSA
122794509 5272 Eudicot View MSA
122048891 5273 Angiosperm View MSA
121349849 5274 Embryophyte View MSA
123426942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain