Gene : Cucsa.349760 C. sativus v1.0
Defline:  (1 of 1) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC Genomic Order:  124
Name:  ? Cucsa.349760 Secondary Identifier:  ? PAC:16979842
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5173 Cucumis sativus pathologic  
Csativus PWY-5464 Cucumis sativus pathologic  
Csativus PYRUVDEHYD-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.349760 0.5kb upstream 0.5kb upstream 3404 true scaffold03487: 969018-972421 Cucumis sativus
Cucsa.349760 0.5kb upstream 0.5kb upstream 500 false scaffold03487: 969018-969517 Cucumis sativus
Cucsa.349760 0.5kb downstream 0.5kb downstream 3404 true scaffold03487: 969518-972921 Cucumis sativus
Cucsa.349760 0.5kb downstream 0.5kb downstream 500 false scaffold03487: 972422-972921 Cucumis sativus
Cucsa.349760 1.0kb upstream 1.0kb upstream 3904 true scaffold03487: 968518-972421 Cucumis sativus
Cucsa.349760 1.0kb upstream 1.0kb upstream 1000 false scaffold03487: 968518-969517 Cucumis sativus
Cucsa.349760 1.0kb downstream 1.0kb downstream 3904 true scaffold03487: 969518-973421 Cucumis sativus
Cucsa.349760 1.0kb downstream 1.0kb downstream 1000 false scaffold03487: 972422-973421 Cucumis sativus
Cucsa.349760 2.0kb upstream 2.0kb upstream 4904 true scaffold03487: 967518-972421 Cucumis sativus
Cucsa.349760 2.0kb upstream 2.0kb upstream 2000 false scaffold03487: 967518-969517 Cucumis sativus
Cucsa.349760 2.0kb downstream 2.0kb downstream 4904 true scaffold03487: 969518-974421 Cucumis sativus
Cucsa.349760 2.0kb downstream 2.0kb downstream 2000 false scaffold03487: 972422-974421 Cucumis sativus
Cucsa.349760 5.0kb upstream 5.0kb upstream 7904 true scaffold03487: 964518-972421 Cucumis sativus
Cucsa.349760 5.0kb upstream 5.0kb upstream 5000 false scaffold03487: 964518-969517 Cucumis sativus
Cucsa.349760 5.0kb downstream 5.0kb downstream 7904 true scaffold03487: 969518-977421 Cucumis sativus
Cucsa.349760 5.0kb downstream 5.0kb downstream 5000 false scaffold03487: 972422-977421 Cucumis sativus
Cucsa.349760 10.0kb upstream 10.0kb upstream 12904 true scaffold03487: 959518-972421 Cucumis sativus
Cucsa.349760 10.0kb upstream 10.0kb upstream 10000 false scaffold03487: 959518-969517 Cucumis sativus
Cucsa.349760 10.0kb downstream 10.0kb downstream 12904 true scaffold03487: 969518-982421 Cucumis sativus
Cucsa.349760 10.0kb downstream 10.0kb downstream 10000 false scaffold03487: 972422-982421 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309169 5265 Fabidae View MSA
124066481 5270 Rosid View MSA
123745685 5271 Pentapetalae View MSA
122791580 5272 Eudicot View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain