Gene : Cucsa.358650 C. sativus v1.0
Defline:  (1 of 3) PTHR22763:SF44 - E3 UBIQUITIN LIGASE Genomic Order:  19
Name:  ? Cucsa.358650 Secondary Identifier:  ? PAC:16980486
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.358650 0.5kb upstream 0.5kb upstream 3328 true scaffold03586: 277344-280671 Cucumis sativus
Cucsa.358650 0.5kb upstream 0.5kb upstream 500 false scaffold03586: 277344-277843 Cucumis sativus
Cucsa.358650 0.5kb downstream 0.5kb downstream 3328 true scaffold03586: 277844-281171 Cucumis sativus
Cucsa.358650 0.5kb downstream 0.5kb downstream 500 false scaffold03586: 280672-281171 Cucumis sativus
Cucsa.358650 1.0kb upstream 1.0kb upstream 3828 true scaffold03586: 276844-280671 Cucumis sativus
Cucsa.358650 1.0kb upstream 1.0kb upstream 1000 false scaffold03586: 276844-277843 Cucumis sativus
Cucsa.358650 1.0kb downstream 1.0kb downstream 3828 true scaffold03586: 277844-281671 Cucumis sativus
Cucsa.358650 1.0kb downstream 1.0kb downstream 1000 false scaffold03586: 280672-281671 Cucumis sativus
Cucsa.358650 2.0kb upstream 2.0kb upstream 4828 true scaffold03586: 275844-280671 Cucumis sativus
Cucsa.358650 2.0kb upstream 2.0kb upstream 2000 false scaffold03586: 275844-277843 Cucumis sativus
Cucsa.358650 2.0kb downstream 2.0kb downstream 4828 true scaffold03586: 277844-282671 Cucumis sativus
Cucsa.358650 2.0kb downstream 2.0kb downstream 2000 false scaffold03586: 280672-282671 Cucumis sativus
Cucsa.358650 5.0kb upstream 5.0kb upstream 7828 true scaffold03586: 272844-280671 Cucumis sativus
Cucsa.358650 5.0kb upstream 5.0kb upstream 5000 false scaffold03586: 272844-277843 Cucumis sativus
Cucsa.358650 5.0kb downstream 5.0kb downstream 7828 true scaffold03586: 277844-285671 Cucumis sativus
Cucsa.358650 5.0kb downstream 5.0kb downstream 5000 false scaffold03586: 280672-285671 Cucumis sativus
Cucsa.358650 10.0kb upstream 10.0kb upstream 12828 true scaffold03586: 267844-280671 Cucumis sativus
Cucsa.358650 10.0kb upstream 10.0kb upstream 10000 false scaffold03586: 267844-277843 Cucumis sativus
Cucsa.358650 10.0kb downstream 10.0kb downstream 12828 true scaffold03586: 277844-290671 Cucumis sativus
Cucsa.358650 10.0kb downstream 10.0kb downstream 10000 false scaffold03586: 280672-290671 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311053 5265 Fabidae View MSA
124070952 5270 Rosid View MSA
123745999 5271 Pentapetalae View MSA
122790564 5272 Eudicot View MSA
122048435 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain