Gene : Cucsa.359780 C. sativus v1.0
Defline:  (1 of 4) PTHR31707:SF55 - PECTINESTERASE 2-RELATED Genomic Order:  88
Name:  ? Cucsa.359780 Secondary Identifier:  ? PAC:16980636
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.359780 0.5kb upstream 0.5kb upstream 5227 true scaffold03588: 596136-601362 Cucumis sativus
Cucsa.359780 0.5kb upstream 0.5kb upstream 500 false scaffold03588: 596136-596635 Cucumis sativus
Cucsa.359780 0.5kb downstream 0.5kb downstream 5227 true scaffold03588: 596636-601862 Cucumis sativus
Cucsa.359780 0.5kb downstream 0.5kb downstream 500 false scaffold03588: 601363-601862 Cucumis sativus
Cucsa.359780 1.0kb upstream 1.0kb upstream 5727 true scaffold03588: 595636-601362 Cucumis sativus
Cucsa.359780 1.0kb upstream 1.0kb upstream 1000 false scaffold03588: 595636-596635 Cucumis sativus
Cucsa.359780 1.0kb downstream 1.0kb downstream 5727 true scaffold03588: 596636-602362 Cucumis sativus
Cucsa.359780 1.0kb downstream 1.0kb downstream 1000 false scaffold03588: 601363-602362 Cucumis sativus
Cucsa.359780 2.0kb upstream 2.0kb upstream 6727 true scaffold03588: 594636-601362 Cucumis sativus
Cucsa.359780 2.0kb upstream 2.0kb upstream 2000 false scaffold03588: 594636-596635 Cucumis sativus
Cucsa.359780 2.0kb downstream 2.0kb downstream 6727 true scaffold03588: 596636-603362 Cucumis sativus
Cucsa.359780 2.0kb downstream 2.0kb downstream 2000 false scaffold03588: 601363-603362 Cucumis sativus
Cucsa.359780 5.0kb upstream 5.0kb upstream 9727 true scaffold03588: 591636-601362 Cucumis sativus
Cucsa.359780 5.0kb upstream 5.0kb upstream 5000 false scaffold03588: 591636-596635 Cucumis sativus
Cucsa.359780 5.0kb downstream 5.0kb downstream 9727 true scaffold03588: 596636-606362 Cucumis sativus
Cucsa.359780 5.0kb downstream 5.0kb downstream 5000 false scaffold03588: 601363-606362 Cucumis sativus
Cucsa.359780 10.0kb upstream 10.0kb upstream 14727 true scaffold03588: 586636-601362 Cucumis sativus
Cucsa.359780 10.0kb upstream 10.0kb upstream 10000 false scaffold03588: 586636-596635 Cucumis sativus
Cucsa.359780 10.0kb downstream 10.0kb downstream 14727 true scaffold03588: 596636-611362 Cucumis sativus
Cucsa.359780 10.0kb downstream 10.0kb downstream 10000 false scaffold03588: 601363-611362 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313065 5265 Fabidae View MSA
124060766 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain