Gene : Cucsa.360190 C. sativus v1.0
Defline:  (1 of 1) PTHR11771:SF38 - LIPOXYGENASE 3, CHLOROPLASTIC-RELATED Genomic Order:  129
Name:  ? Cucsa.360190 Secondary Identifier:  ? PAC:16980706
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-5409 Cucumis sativus pathologic  
Csativus PWY-5410 Cucumis sativus pathologic  
Csativus PWY-735 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.360190 0.5kb upstream 0.5kb upstream 4589 true scaffold03588: 929955-934543 Cucumis sativus
Cucsa.360190 0.5kb upstream 0.5kb upstream 500 false scaffold03588: 929955-930454 Cucumis sativus
Cucsa.360190 0.5kb downstream 0.5kb downstream 4589 true scaffold03588: 930455-935043 Cucumis sativus
Cucsa.360190 0.5kb downstream 0.5kb downstream 500 false scaffold03588: 934544-935043 Cucumis sativus
Cucsa.360190 1.0kb upstream 1.0kb upstream 5089 true scaffold03588: 929455-934543 Cucumis sativus
Cucsa.360190 1.0kb upstream 1.0kb upstream 1000 false scaffold03588: 929455-930454 Cucumis sativus
Cucsa.360190 1.0kb downstream 1.0kb downstream 5089 true scaffold03588: 930455-935543 Cucumis sativus
Cucsa.360190 1.0kb downstream 1.0kb downstream 1000 false scaffold03588: 934544-935543 Cucumis sativus
Cucsa.360190 2.0kb upstream 2.0kb upstream 6089 true scaffold03588: 928455-934543 Cucumis sativus
Cucsa.360190 2.0kb upstream 2.0kb upstream 2000 false scaffold03588: 928455-930454 Cucumis sativus
Cucsa.360190 2.0kb downstream 2.0kb downstream 6089 true scaffold03588: 930455-936543 Cucumis sativus
Cucsa.360190 2.0kb downstream 2.0kb downstream 2000 false scaffold03588: 934544-936543 Cucumis sativus
Cucsa.360190 5.0kb upstream 5.0kb upstream 9089 true scaffold03588: 925455-934543 Cucumis sativus
Cucsa.360190 5.0kb upstream 5.0kb upstream 5000 false scaffold03588: 925455-930454 Cucumis sativus
Cucsa.360190 5.0kb downstream 5.0kb downstream 9089 true scaffold03588: 930455-939543 Cucumis sativus
Cucsa.360190 5.0kb downstream 5.0kb downstream 5000 false scaffold03588: 934544-939543 Cucumis sativus
Cucsa.360190 10.0kb upstream 10.0kb upstream 14089 true scaffold03588: 920455-934543 Cucumis sativus
Cucsa.360190 10.0kb upstream 10.0kb upstream 10000 false scaffold03588: 920455-930454 Cucumis sativus
Cucsa.360190 10.0kb downstream 10.0kb downstream 14089 true scaffold03588: 930455-944543 Cucumis sativus
Cucsa.360190 10.0kb downstream 10.0kb downstream 10000 false scaffold03588: 934544-944543 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300976 5265 Fabidae View MSA
124060591 5270 Rosid View MSA
123743150 5271 Pentapetalae View MSA
122789243 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain