Gene : Cucsa.372770 C. sativus v1.0
Defline:  (1 of 1) PTHR31423:SF3 - PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  3
Name:  ? Cucsa.372770 Secondary Identifier:  ? PAC:16981825
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus TRNA-CHARGING-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.372770 0.5kb upstream 0.5kb upstream 4678 true scaffold03709: 45654-50331 Cucumis sativus
Cucsa.372770 0.5kb upstream 0.5kb upstream 500 false scaffold03709: 45654-46153 Cucumis sativus
Cucsa.372770 0.5kb downstream 0.5kb downstream 4678 true scaffold03709: 46154-50831 Cucumis sativus
Cucsa.372770 0.5kb downstream 0.5kb downstream 500 false scaffold03709: 50332-50831 Cucumis sativus
Cucsa.372770 1.0kb upstream 1.0kb upstream 5178 true scaffold03709: 45154-50331 Cucumis sativus
Cucsa.372770 1.0kb upstream 1.0kb upstream 1000 false scaffold03709: 45154-46153 Cucumis sativus
Cucsa.372770 1.0kb downstream 1.0kb downstream 5178 true scaffold03709: 46154-51331 Cucumis sativus
Cucsa.372770 1.0kb downstream 1.0kb downstream 1000 false scaffold03709: 50332-51331 Cucumis sativus
Cucsa.372770 2.0kb upstream 2.0kb upstream 6178 true scaffold03709: 44154-50331 Cucumis sativus
Cucsa.372770 2.0kb upstream 2.0kb upstream 2000 false scaffold03709: 44154-46153 Cucumis sativus
Cucsa.372770 2.0kb downstream 2.0kb downstream 6178 true scaffold03709: 46154-52331 Cucumis sativus
Cucsa.372770 2.0kb downstream 2.0kb downstream 2000 false scaffold03709: 50332-52331 Cucumis sativus
Cucsa.372770 5.0kb upstream 5.0kb upstream 9178 true scaffold03709: 41154-50331 Cucumis sativus
Cucsa.372770 5.0kb upstream 5.0kb upstream 5000 false scaffold03709: 41154-46153 Cucumis sativus
Cucsa.372770 5.0kb downstream 5.0kb downstream 9178 true scaffold03709: 46154-55331 Cucumis sativus
Cucsa.372770 5.0kb downstream 5.0kb downstream 5000 false scaffold03709: 50332-55331 Cucumis sativus
Cucsa.372770 10.0kb upstream 10.0kb upstream 14178 true scaffold03709: 36154-50331 Cucumis sativus
Cucsa.372770 10.0kb upstream 10.0kb upstream 10000 false scaffold03709: 36154-46153 Cucumis sativus
Cucsa.372770 10.0kb downstream 10.0kb downstream 14178 true scaffold03709: 46154-60331 Cucumis sativus
Cucsa.372770 10.0kb downstream 10.0kb downstream 10000 false scaffold03709: 50332-60331 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304964 5265 Fabidae View MSA
124062922 5270 Rosid View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain