Gene : Cucsa.378600 C. sativus v1.0
Defline:  (1 of 3) PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Genomic Order:  23
Name:  ? Cucsa.378600 Secondary Identifier:  ? PAC:16982077
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.378600 0.5kb upstream 0.5kb upstream 5401 true scaffold03810: 194176-199576 Cucumis sativus
Cucsa.378600 0.5kb upstream 0.5kb upstream 500 false scaffold03810: 194176-194675 Cucumis sativus
Cucsa.378600 0.5kb downstream 0.5kb downstream 5401 true scaffold03810: 194676-200076 Cucumis sativus
Cucsa.378600 0.5kb downstream 0.5kb downstream 500 false scaffold03810: 199577-200076 Cucumis sativus
Cucsa.378600 1.0kb upstream 1.0kb upstream 5901 true scaffold03810: 193676-199576 Cucumis sativus
Cucsa.378600 1.0kb upstream 1.0kb upstream 1000 false scaffold03810: 193676-194675 Cucumis sativus
Cucsa.378600 1.0kb downstream 1.0kb downstream 5901 true scaffold03810: 194676-200576 Cucumis sativus
Cucsa.378600 1.0kb downstream 1.0kb downstream 1000 false scaffold03810: 199577-200576 Cucumis sativus
Cucsa.378600 2.0kb upstream 2.0kb upstream 6901 true scaffold03810: 192676-199576 Cucumis sativus
Cucsa.378600 2.0kb upstream 2.0kb upstream 2000 false scaffold03810: 192676-194675 Cucumis sativus
Cucsa.378600 2.0kb downstream 2.0kb downstream 6901 true scaffold03810: 194676-201576 Cucumis sativus
Cucsa.378600 2.0kb downstream 2.0kb downstream 2000 false scaffold03810: 199577-201576 Cucumis sativus
Cucsa.378600 5.0kb upstream 5.0kb upstream 9901 true scaffold03810: 189676-199576 Cucumis sativus
Cucsa.378600 5.0kb upstream 5.0kb upstream 5000 false scaffold03810: 189676-194675 Cucumis sativus
Cucsa.378600 5.0kb downstream 5.0kb downstream 9901 true scaffold03810: 194676-204576 Cucumis sativus
Cucsa.378600 5.0kb downstream 5.0kb downstream 5000 false scaffold03810: 199577-204576 Cucumis sativus
Cucsa.378600 10.0kb upstream 10.0kb upstream 14901 true scaffold03810: 184676-199576 Cucumis sativus
Cucsa.378600 10.0kb upstream 10.0kb upstream 10000 false scaffold03810: 184676-194675 Cucumis sativus
Cucsa.378600 10.0kb downstream 10.0kb downstream 14901 true scaffold03810: 194676-209576 Cucumis sativus
Cucsa.378600 10.0kb downstream 10.0kb downstream 10000 false scaffold03810: 199577-209576 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313327 5265 Fabidae View MSA
124068201 5270 Rosid View MSA
123749750 5271 Pentapetalae View MSA
122797243 5272 Eudicot View MSA
122051478 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121349885 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain