Gene : Cucsa.381820 C. sativus v1.0
Defline:  (1 of 15) PTHR23201 - EXTENSIN, PROLINE-RICH PROTEIN Genomic Order:  9
Name:  ? Cucsa.381820 Secondary Identifier:  ? PAC:16982249
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.381820 0.5kb upstream 0.5kb upstream 2951 true scaffold03866: 57505-60455 Cucumis sativus
Cucsa.381820 0.5kb upstream 0.5kb upstream 500 false scaffold03866: 59956-60455 Cucumis sativus
Cucsa.381820 0.5kb downstream 0.5kb downstream 2951 true scaffold03866: 57005-59955 Cucumis sativus
Cucsa.381820 0.5kb downstream 0.5kb downstream 500 false scaffold03866: 57005-57504 Cucumis sativus
Cucsa.381820 1.0kb upstream 1.0kb upstream 3451 true scaffold03866: 57505-60955 Cucumis sativus
Cucsa.381820 1.0kb upstream 1.0kb upstream 1000 false scaffold03866: 59956-60955 Cucumis sativus
Cucsa.381820 1.0kb downstream 1.0kb downstream 3451 true scaffold03866: 56505-59955 Cucumis sativus
Cucsa.381820 1.0kb downstream 1.0kb downstream 1000 false scaffold03866: 56505-57504 Cucumis sativus
Cucsa.381820 2.0kb upstream 2.0kb upstream 4451 true scaffold03866: 57505-61955 Cucumis sativus
Cucsa.381820 2.0kb upstream 2.0kb upstream 2000 false scaffold03866: 59956-61955 Cucumis sativus
Cucsa.381820 2.0kb downstream 2.0kb downstream 4451 true scaffold03866: 55505-59955 Cucumis sativus
Cucsa.381820 2.0kb downstream 2.0kb downstream 2000 false scaffold03866: 55505-57504 Cucumis sativus
Cucsa.381820 5.0kb upstream 5.0kb upstream 7451 true scaffold03866: 57505-64955 Cucumis sativus
Cucsa.381820 5.0kb upstream 5.0kb upstream 5000 false scaffold03866: 59956-64955 Cucumis sativus
Cucsa.381820 5.0kb downstream 5.0kb downstream 7451 true scaffold03866: 52505-59955 Cucumis sativus
Cucsa.381820 5.0kb downstream 5.0kb downstream 5000 false scaffold03866: 52505-57504 Cucumis sativus
Cucsa.381820 10.0kb upstream 10.0kb upstream 12451 true scaffold03866: 57505-69955 Cucumis sativus
Cucsa.381820 10.0kb upstream 10.0kb upstream 10000 false scaffold03866: 59956-69955 Cucumis sativus
Cucsa.381820 10.0kb downstream 10.0kb downstream 12451 true scaffold03866: 47505-59955 Cucumis sativus
Cucsa.381820 10.0kb downstream 10.0kb downstream 10000 false scaffold03866: 47505-57504 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313332 5265 Fabidae View MSA
124071058 5270 Rosid View MSA
123753295 5271 Pentapetalae View MSA
122796596 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain