Gene : Medtr1g023230 M. truncatula Mt4.0v1
Defline:  (1 of 10) PF05142 - Domain of unknown function (DUF702) (DUF702) Description:  zinc finger, LRP1 type protein
Genomic Order:  980 Name:  ? Medtr1g023230
Secondary Identifier:  ? PAC:31097827
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g023230 0.5kb upstream 0.5kb upstream 2080 true chr1: 7417436-7419515 Medicago truncatula
Medtr1g023230 0.5kb upstream 0.5kb upstream 500 false chr1: 7419016-7419515 Medicago truncatula
Medtr1g023230 0.5kb downstream 0.5kb downstream 2080 true chr1: 7416936-7419015 Medicago truncatula
Medtr1g023230 0.5kb downstream 0.5kb downstream 500 false chr1: 7416936-7417435 Medicago truncatula
Medtr1g023230 1.0kb upstream 1.0kb upstream 2580 true chr1: 7417436-7420015 Medicago truncatula
Medtr1g023230 1.0kb upstream 1.0kb upstream 1000 false chr1: 7419016-7420015 Medicago truncatula
Medtr1g023230 1.0kb downstream 1.0kb downstream 2580 true chr1: 7416436-7419015 Medicago truncatula
Medtr1g023230 1.0kb downstream 1.0kb downstream 1000 false chr1: 7416436-7417435 Medicago truncatula
Medtr1g023230 2.0kb upstream 2.0kb upstream 3580 true chr1: 7417436-7421015 Medicago truncatula
Medtr1g023230 2.0kb upstream 2.0kb upstream 2000 false chr1: 7419016-7421015 Medicago truncatula
Medtr1g023230 2.0kb downstream 2.0kb downstream 3580 true chr1: 7415436-7419015 Medicago truncatula
Medtr1g023230 2.0kb downstream 2.0kb downstream 2000 false chr1: 7415436-7417435 Medicago truncatula
Medtr1g023230 5.0kb upstream 5.0kb upstream 6580 true chr1: 7417436-7424015 Medicago truncatula
Medtr1g023230 5.0kb upstream 5.0kb upstream 5000 false chr1: 7419016-7424015 Medicago truncatula
Medtr1g023230 5.0kb downstream 5.0kb downstream 6580 true chr1: 7412436-7419015 Medicago truncatula
Medtr1g023230 5.0kb downstream 5.0kb downstream 5000 false chr1: 7412436-7417435 Medicago truncatula
Medtr1g023230 10.0kb upstream 10.0kb upstream 11580 true chr1: 7417436-7429015 Medicago truncatula
Medtr1g023230 10.0kb upstream 10.0kb upstream 10000 false chr1: 7419016-7429015 Medicago truncatula
Medtr1g023230 10.0kb downstream 10.0kb downstream 11580 true chr1: 7407436-7419015 Medicago truncatula
Medtr1g023230 10.0kb downstream 10.0kb downstream 10000 false chr1: 7407436-7417435 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311676 5265 Fabidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.128       High
cufflinks 0.009     Low  
cufflinks 0.009     Low  
cufflinks 0.122       High
cufflinks 0.008     Low  
cufflinks 0.07     Low  
cufflinks 0.008     Low  
cufflinks 0.007     Low  
cufflinks 0.153       High

0 Strain