Gene : Medtr1g026310 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR24096:SF186 - 4-COUMARATE--COA LIGASE-LIKE 2-RELATED Description:  acyl:CoA ligase
Genomic Order:  1139 Name:  ? Medtr1g026310
Secondary Identifier:  ? PAC:31094354
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g026310 0.5kb upstream 0.5kb upstream 3710 true chr1: 8532183-8535892 Medicago truncatula
Medtr1g026310 0.5kb upstream 0.5kb upstream 500 false chr1: 8535393-8535892 Medicago truncatula
Medtr1g026310 0.5kb downstream 0.5kb downstream 3710 true chr1: 8531683-8535392 Medicago truncatula
Medtr1g026310 0.5kb downstream 0.5kb downstream 500 false chr1: 8531683-8532182 Medicago truncatula
Medtr1g026310 1.0kb upstream 1.0kb upstream 4210 true chr1: 8532183-8536392 Medicago truncatula
Medtr1g026310 1.0kb upstream 1.0kb upstream 1000 false chr1: 8535393-8536392 Medicago truncatula
Medtr1g026310 1.0kb downstream 1.0kb downstream 4210 true chr1: 8531183-8535392 Medicago truncatula
Medtr1g026310 1.0kb downstream 1.0kb downstream 1000 false chr1: 8531183-8532182 Medicago truncatula
Medtr1g026310 2.0kb upstream 2.0kb upstream 5210 true chr1: 8532183-8537392 Medicago truncatula
Medtr1g026310 2.0kb upstream 2.0kb upstream 2000 false chr1: 8535393-8537392 Medicago truncatula
Medtr1g026310 2.0kb downstream 2.0kb downstream 5210 true chr1: 8530183-8535392 Medicago truncatula
Medtr1g026310 2.0kb downstream 2.0kb downstream 2000 false chr1: 8530183-8532182 Medicago truncatula
Medtr1g026310 5.0kb upstream 5.0kb upstream 8210 true chr1: 8532183-8540392 Medicago truncatula
Medtr1g026310 5.0kb upstream 5.0kb upstream 5000 false chr1: 8535393-8540392 Medicago truncatula
Medtr1g026310 5.0kb downstream 5.0kb downstream 8210 true chr1: 8527183-8535392 Medicago truncatula
Medtr1g026310 5.0kb downstream 5.0kb downstream 5000 false chr1: 8527183-8532182 Medicago truncatula
Medtr1g026310 10.0kb upstream 10.0kb upstream 13210 true chr1: 8532183-8545392 Medicago truncatula
Medtr1g026310 10.0kb upstream 10.0kb upstream 10000 false chr1: 8535393-8545392 Medicago truncatula
Medtr1g026310 10.0kb downstream 10.0kb downstream 13210 true chr1: 8522183-8535392 Medicago truncatula
Medtr1g026310 10.0kb downstream 10.0kb downstream 10000 false chr1: 8522183-8532182 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299586 5265 Fabidae View MSA
124062315 5270 Rosid View MSA
123736531 5271 Pentapetalae View MSA
122785928 5272 Eudicot View MSA
122043430 5273 Angiosperm View MSA
121350022 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.97        
cufflinks 7.989        
cufflinks 1.528       Low
cufflinks 10.781     High  
cufflinks 1.286       Low
cufflinks 5.82        
cufflinks 18.744     High  
cufflinks 3.988        
cufflinks 46.236     High High

0 Strain