Gene : Medtr1g026170 M. truncatula Mt4.0v1
Defline:  (1 of 9) 3.2.1.1 - Alpha-amylase / Glycogenase Description:  alpha amylase domain protein
Genomic Order:  1136 Name:  ? Medtr1g026170
Secondary Identifier:  ? PAC:31094392
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g026170 0.5kb upstream 0.5kb upstream 5906 true chr1: 8455346-8461251 Medicago truncatula
Medtr1g026170 0.5kb upstream 0.5kb upstream 500 false chr1: 8455346-8455845 Medicago truncatula
Medtr1g026170 0.5kb downstream 0.5kb downstream 5906 true chr1: 8455846-8461751 Medicago truncatula
Medtr1g026170 0.5kb downstream 0.5kb downstream 500 false chr1: 8461252-8461751 Medicago truncatula
Medtr1g026170 1.0kb upstream 1.0kb upstream 6406 true chr1: 8454846-8461251 Medicago truncatula
Medtr1g026170 1.0kb upstream 1.0kb upstream 1000 false chr1: 8454846-8455845 Medicago truncatula
Medtr1g026170 1.0kb downstream 1.0kb downstream 6406 true chr1: 8455846-8462251 Medicago truncatula
Medtr1g026170 1.0kb downstream 1.0kb downstream 1000 false chr1: 8461252-8462251 Medicago truncatula
Medtr1g026170 2.0kb upstream 2.0kb upstream 7406 true chr1: 8453846-8461251 Medicago truncatula
Medtr1g026170 2.0kb upstream 2.0kb upstream 2000 false chr1: 8453846-8455845 Medicago truncatula
Medtr1g026170 2.0kb downstream 2.0kb downstream 7406 true chr1: 8455846-8463251 Medicago truncatula
Medtr1g026170 2.0kb downstream 2.0kb downstream 2000 false chr1: 8461252-8463251 Medicago truncatula
Medtr1g026170 5.0kb upstream 5.0kb upstream 10406 true chr1: 8450846-8461251 Medicago truncatula
Medtr1g026170 5.0kb upstream 5.0kb upstream 5000 false chr1: 8450846-8455845 Medicago truncatula
Medtr1g026170 5.0kb downstream 5.0kb downstream 10406 true chr1: 8455846-8466251 Medicago truncatula
Medtr1g026170 5.0kb downstream 5.0kb downstream 5000 false chr1: 8461252-8466251 Medicago truncatula
Medtr1g026170 10.0kb upstream 10.0kb upstream 15406 true chr1: 8445846-8461251 Medicago truncatula
Medtr1g026170 10.0kb upstream 10.0kb upstream 10000 false chr1: 8445846-8455845 Medicago truncatula
Medtr1g026170 10.0kb downstream 10.0kb downstream 15406 true chr1: 8455846-8471251 Medicago truncatula
Medtr1g026170 10.0kb downstream 10.0kb downstream 10000 false chr1: 8461252-8471251 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303124 5265 Fabidae View MSA
124067606 5270 Rosid View MSA
123751733 5271 Pentapetalae View MSA
122785800 5272 Eudicot View MSA
122050125 5273 Angiosperm View MSA
121348688 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.105       High
cufflinks 1.084        
cufflinks 1.514        
cufflinks 0.564       Low
cufflinks 1.378        
cufflinks 0.409       Low
cufflinks 1.25        
cufflinks 1.063        
cufflinks 1.576        

0 Strain