Gene : Medtr1g027640 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF00069//PF07645//PF08488//PF13947 - Protein kinase domain (Pkinase) // Calcium-binding EGF domain (EGF_CA) // Wall-associated kinase (WAK) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Description:  wall-associated receptor kinase-like protein
Genomic Order:  1227 Name:  ? Medtr1g027640
Secondary Identifier:  ? PAC:31097458
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g027640 0.5kb upstream 0.5kb upstream 4750 true chr1: 9199322-9204071 Medicago truncatula
Medtr1g027640 0.5kb upstream 0.5kb upstream 500 false chr1: 9203572-9204071 Medicago truncatula
Medtr1g027640 0.5kb downstream 0.5kb downstream 4750 true chr1: 9198822-9203571 Medicago truncatula
Medtr1g027640 0.5kb downstream 0.5kb downstream 500 false chr1: 9198822-9199321 Medicago truncatula
Medtr1g027640 1.0kb upstream 1.0kb upstream 5250 true chr1: 9199322-9204571 Medicago truncatula
Medtr1g027640 1.0kb upstream 1.0kb upstream 1000 false chr1: 9203572-9204571 Medicago truncatula
Medtr1g027640 1.0kb downstream 1.0kb downstream 5250 true chr1: 9198322-9203571 Medicago truncatula
Medtr1g027640 1.0kb downstream 1.0kb downstream 1000 false chr1: 9198322-9199321 Medicago truncatula
Medtr1g027640 2.0kb upstream 2.0kb upstream 6250 true chr1: 9199322-9205571 Medicago truncatula
Medtr1g027640 2.0kb upstream 2.0kb upstream 2000 false chr1: 9203572-9205571 Medicago truncatula
Medtr1g027640 2.0kb downstream 2.0kb downstream 6250 true chr1: 9197322-9203571 Medicago truncatula
Medtr1g027640 2.0kb downstream 2.0kb downstream 2000 false chr1: 9197322-9199321 Medicago truncatula
Medtr1g027640 5.0kb upstream 5.0kb upstream 9250 true chr1: 9199322-9208571 Medicago truncatula
Medtr1g027640 5.0kb upstream 5.0kb upstream 5000 false chr1: 9203572-9208571 Medicago truncatula
Medtr1g027640 5.0kb downstream 5.0kb downstream 9250 true chr1: 9194322-9203571 Medicago truncatula
Medtr1g027640 5.0kb downstream 5.0kb downstream 5000 false chr1: 9194322-9199321 Medicago truncatula
Medtr1g027640 10.0kb upstream 10.0kb upstream 14250 true chr1: 9199322-9213571 Medicago truncatula
Medtr1g027640 10.0kb upstream 10.0kb upstream 10000 false chr1: 9203572-9213571 Medicago truncatula
Medtr1g027640 10.0kb downstream 10.0kb downstream 14250 true chr1: 9189322-9203571 Medicago truncatula
Medtr1g027640 10.0kb downstream 10.0kb downstream 10000 false chr1: 9189322-9199321 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315140 5265 Fabidae View MSA
124072250 5270 Rosid View MSA
123752135 5271 Pentapetalae View MSA
122797292 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.717       High
cufflinks 1.866        
cufflinks 1.65        
cufflinks 2.309        
cufflinks 1.763        
cufflinks 13.263     High High
cufflinks 4.465        
cufflinks 1.883        
cufflinks 1.703        

0 Strain