Gene : Medtr1g027600 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF00069//PF07645//PF08488//PF13947 - Protein kinase domain (Pkinase) // Calcium-binding EGF domain (EGF_CA) // Wall-associated kinase (WAK) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Description:  wall-associated receptor kinase-like protein
Genomic Order:  1224 Name:  ? Medtr1g027600
Secondary Identifier:  ? PAC:31096048
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g027600 0.5kb upstream 0.5kb upstream 7003 true chr1: 9170008-9177010 Medicago truncatula
Medtr1g027600 0.5kb upstream 0.5kb upstream 500 false chr1: 9176511-9177010 Medicago truncatula
Medtr1g027600 0.5kb downstream 0.5kb downstream 7003 true chr1: 9169508-9176510 Medicago truncatula
Medtr1g027600 0.5kb downstream 0.5kb downstream 500 false chr1: 9169508-9170007 Medicago truncatula
Medtr1g027600 1.0kb upstream 1.0kb upstream 7503 true chr1: 9170008-9177510 Medicago truncatula
Medtr1g027600 1.0kb upstream 1.0kb upstream 1000 false chr1: 9176511-9177510 Medicago truncatula
Medtr1g027600 1.0kb downstream 1.0kb downstream 7503 true chr1: 9169008-9176510 Medicago truncatula
Medtr1g027600 1.0kb downstream 1.0kb downstream 1000 false chr1: 9169008-9170007 Medicago truncatula
Medtr1g027600 2.0kb upstream 2.0kb upstream 8503 true chr1: 9170008-9178510 Medicago truncatula
Medtr1g027600 2.0kb upstream 2.0kb upstream 2000 false chr1: 9176511-9178510 Medicago truncatula
Medtr1g027600 2.0kb downstream 2.0kb downstream 8503 true chr1: 9168008-9176510 Medicago truncatula
Medtr1g027600 2.0kb downstream 2.0kb downstream 2000 false chr1: 9168008-9170007 Medicago truncatula
Medtr1g027600 5.0kb upstream 5.0kb upstream 11503 true chr1: 9170008-9181510 Medicago truncatula
Medtr1g027600 5.0kb upstream 5.0kb upstream 5000 false chr1: 9176511-9181510 Medicago truncatula
Medtr1g027600 5.0kb downstream 5.0kb downstream 11503 true chr1: 9165008-9176510 Medicago truncatula
Medtr1g027600 5.0kb downstream 5.0kb downstream 5000 false chr1: 9165008-9170007 Medicago truncatula
Medtr1g027600 10.0kb upstream 10.0kb upstream 16503 true chr1: 9170008-9186510 Medicago truncatula
Medtr1g027600 10.0kb upstream 10.0kb upstream 10000 false chr1: 9176511-9186510 Medicago truncatula
Medtr1g027600 10.0kb downstream 10.0kb downstream 16503 true chr1: 9160008-9176510 Medicago truncatula
Medtr1g027600 10.0kb downstream 10.0kb downstream 10000 false chr1: 9160008-9170007 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315140 5265 Fabidae View MSA
124072250 5270 Rosid View MSA
123752135 5271 Pentapetalae View MSA
122797292 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.158        
cufflinks 0.258        
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.18        
cufflinks 0.047     Low  
cufflinks 0.007     Low Low
cufflinks 0.117        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain