Gene : Medtr1g027050 M. truncatula Mt4.0v1
Defline:  (1 of 9) PF07714//PF13947 - Protein tyrosine kinase (Pkinase_Tyr) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Description:  stress-induced receptor-like kinase
Genomic Order:  1192 Name:  ? Medtr1g027050
Secondary Identifier:  ? PAC:31093348
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7409 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g027050 0.5kb upstream 0.5kb upstream 5690 true chr1: 8931485-8937174 Medicago truncatula
Medtr1g027050 0.5kb upstream 0.5kb upstream 500 false chr1: 8936675-8937174 Medicago truncatula
Medtr1g027050 0.5kb downstream 0.5kb downstream 5690 true chr1: 8930985-8936674 Medicago truncatula
Medtr1g027050 0.5kb downstream 0.5kb downstream 500 false chr1: 8930985-8931484 Medicago truncatula
Medtr1g027050 1.0kb upstream 1.0kb upstream 6190 true chr1: 8931485-8937674 Medicago truncatula
Medtr1g027050 1.0kb upstream 1.0kb upstream 1000 false chr1: 8936675-8937674 Medicago truncatula
Medtr1g027050 1.0kb downstream 1.0kb downstream 6190 true chr1: 8930485-8936674 Medicago truncatula
Medtr1g027050 1.0kb downstream 1.0kb downstream 1000 false chr1: 8930485-8931484 Medicago truncatula
Medtr1g027050 2.0kb upstream 2.0kb upstream 7190 true chr1: 8931485-8938674 Medicago truncatula
Medtr1g027050 2.0kb upstream 2.0kb upstream 2000 false chr1: 8936675-8938674 Medicago truncatula
Medtr1g027050 2.0kb downstream 2.0kb downstream 7190 true chr1: 8929485-8936674 Medicago truncatula
Medtr1g027050 2.0kb downstream 2.0kb downstream 2000 false chr1: 8929485-8931484 Medicago truncatula
Medtr1g027050 5.0kb upstream 5.0kb upstream 10190 true chr1: 8931485-8941674 Medicago truncatula
Medtr1g027050 5.0kb upstream 5.0kb upstream 5000 false chr1: 8936675-8941674 Medicago truncatula
Medtr1g027050 5.0kb downstream 5.0kb downstream 10190 true chr1: 8926485-8936674 Medicago truncatula
Medtr1g027050 5.0kb downstream 5.0kb downstream 5000 false chr1: 8926485-8931484 Medicago truncatula
Medtr1g027050 10.0kb upstream 10.0kb upstream 15190 true chr1: 8931485-8946674 Medicago truncatula
Medtr1g027050 10.0kb upstream 10.0kb upstream 10000 false chr1: 8936675-8946674 Medicago truncatula
Medtr1g027050 10.0kb downstream 10.0kb downstream 15190 true chr1: 8921485-8936674 Medicago truncatula
Medtr1g027050 10.0kb downstream 10.0kb downstream 10000 false chr1: 8921485-8931484 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314435 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.457       High
cufflinks 0.054     Low Low
cufflinks 0.103        
cufflinks 0.191        
cufflinks 0.116        
cufflinks 1.842       High
cufflinks 0.777        
cufflinks 0.092        
cufflinks 0.292        

0 Strain