Gene : Medtr1g027030 M. truncatula Mt4.0v1
Defline:  (1 of 16) PF00069//PF13947 - Protein kinase domain (Pkinase) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Description:  stress-induced receptor-like kinase
Genomic Order:  1190 Name:  ? Medtr1g027030
Secondary Identifier:  ? PAC:31095623
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7409 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g027030 0.5kb upstream 0.5kb upstream 5432 true chr1: 8920173-8925604 Medicago truncatula
Medtr1g027030 0.5kb upstream 0.5kb upstream 500 false chr1: 8925105-8925604 Medicago truncatula
Medtr1g027030 0.5kb downstream 0.5kb downstream 5432 true chr1: 8919673-8925104 Medicago truncatula
Medtr1g027030 0.5kb downstream 0.5kb downstream 500 false chr1: 8919673-8920172 Medicago truncatula
Medtr1g027030 1.0kb upstream 1.0kb upstream 5932 true chr1: 8920173-8926104 Medicago truncatula
Medtr1g027030 1.0kb upstream 1.0kb upstream 1000 false chr1: 8925105-8926104 Medicago truncatula
Medtr1g027030 1.0kb downstream 1.0kb downstream 5932 true chr1: 8919173-8925104 Medicago truncatula
Medtr1g027030 1.0kb downstream 1.0kb downstream 1000 false chr1: 8919173-8920172 Medicago truncatula
Medtr1g027030 2.0kb upstream 2.0kb upstream 6932 true chr1: 8920173-8927104 Medicago truncatula
Medtr1g027030 2.0kb upstream 2.0kb upstream 2000 false chr1: 8925105-8927104 Medicago truncatula
Medtr1g027030 2.0kb downstream 2.0kb downstream 6932 true chr1: 8918173-8925104 Medicago truncatula
Medtr1g027030 2.0kb downstream 2.0kb downstream 2000 false chr1: 8918173-8920172 Medicago truncatula
Medtr1g027030 5.0kb upstream 5.0kb upstream 9932 true chr1: 8920173-8930104 Medicago truncatula
Medtr1g027030 5.0kb upstream 5.0kb upstream 5000 false chr1: 8925105-8930104 Medicago truncatula
Medtr1g027030 5.0kb downstream 5.0kb downstream 9932 true chr1: 8915173-8925104 Medicago truncatula
Medtr1g027030 5.0kb downstream 5.0kb downstream 5000 false chr1: 8915173-8920172 Medicago truncatula
Medtr1g027030 10.0kb upstream 10.0kb upstream 14932 true chr1: 8920173-8935104 Medicago truncatula
Medtr1g027030 10.0kb upstream 10.0kb upstream 10000 false chr1: 8925105-8935104 Medicago truncatula
Medtr1g027030 10.0kb downstream 10.0kb downstream 14932 true chr1: 8910173-8925104 Medicago truncatula
Medtr1g027030 10.0kb downstream 10.0kb downstream 10000 false chr1: 8910173-8920172 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314435 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.287        
cufflinks 0.23        
cufflinks 0.298        
cufflinks 0.079       Low
cufflinks 0.285        
cufflinks 0.287        
cufflinks 0.181        
cufflinks 0.192        
cufflinks 0.111       Low

0 Strain