Gene : Medtr1g029500 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF12937//PF13516 - F-box-like (F-box-like) // Leucine Rich repeat (LRR_6) Description:  F-box SKP2A-like protein
Genomic Order:  1356 Name:  ? Medtr1g029500
Secondary Identifier:  ? PAC:31093893
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g029500 0.5kb upstream 0.5kb upstream 3012 true chr1: 10130817-10133828 Medicago truncatula
Medtr1g029500 0.5kb upstream 0.5kb upstream 500 false chr1: 10133329-10133828 Medicago truncatula
Medtr1g029500 0.5kb downstream 0.5kb downstream 3012 true chr1: 10130317-10133328 Medicago truncatula
Medtr1g029500 0.5kb downstream 0.5kb downstream 500 false chr1: 10130317-10130816 Medicago truncatula
Medtr1g029500 1.0kb upstream 1.0kb upstream 3512 true chr1: 10130817-10134328 Medicago truncatula
Medtr1g029500 1.0kb upstream 1.0kb upstream 1000 false chr1: 10133329-10134328 Medicago truncatula
Medtr1g029500 1.0kb downstream 1.0kb downstream 3512 true chr1: 10129817-10133328 Medicago truncatula
Medtr1g029500 1.0kb downstream 1.0kb downstream 1000 false chr1: 10129817-10130816 Medicago truncatula
Medtr1g029500 2.0kb upstream 2.0kb upstream 4512 true chr1: 10130817-10135328 Medicago truncatula
Medtr1g029500 2.0kb upstream 2.0kb upstream 2000 false chr1: 10133329-10135328 Medicago truncatula
Medtr1g029500 2.0kb downstream 2.0kb downstream 4512 true chr1: 10128817-10133328 Medicago truncatula
Medtr1g029500 2.0kb downstream 2.0kb downstream 2000 false chr1: 10128817-10130816 Medicago truncatula
Medtr1g029500 5.0kb upstream 5.0kb upstream 7512 true chr1: 10130817-10138328 Medicago truncatula
Medtr1g029500 5.0kb upstream 5.0kb upstream 5000 false chr1: 10133329-10138328 Medicago truncatula
Medtr1g029500 5.0kb downstream 5.0kb downstream 7512 true chr1: 10125817-10133328 Medicago truncatula
Medtr1g029500 5.0kb downstream 5.0kb downstream 5000 false chr1: 10125817-10130816 Medicago truncatula
Medtr1g029500 10.0kb upstream 10.0kb upstream 12512 true chr1: 10130817-10143328 Medicago truncatula
Medtr1g029500 10.0kb upstream 10.0kb upstream 10000 false chr1: 10133329-10143328 Medicago truncatula
Medtr1g029500 10.0kb downstream 10.0kb downstream 12512 true chr1: 10120817-10133328 Medicago truncatula
Medtr1g029500 10.0kb downstream 10.0kb downstream 10000 false chr1: 10120817-10130816 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295104 5265 Fabidae View MSA
124064760 5270 Rosid View MSA
123742186 5271 Pentapetalae View MSA
122792063 5272 Eudicot View MSA
122043251 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121350189 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 120.502     High High
cufflinks 1.752       Low
cufflinks 8.643        
cufflinks 16.622     High  
cufflinks 1.933       Low
cufflinks 6.148        
cufflinks 30.233     High  
cufflinks 8.873        
cufflinks 10.053        

0 Strain