Gene : Medtr1g029410 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12801:SF51 - PROTEIN Y56A3A.33 Description:  small RNA degrading nuclease
Genomic Order:  1348 Name:  ? Medtr1g029410
Secondary Identifier:  ? PAC:31095086
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g029410 0.5kb upstream 0.5kb upstream 10082 true chr1: 10081300-10091381 Medicago truncatula
Medtr1g029410 0.5kb upstream 0.5kb upstream 500 false chr1: 10081300-10081799 Medicago truncatula
Medtr1g029410 0.5kb downstream 0.5kb downstream 10082 true chr1: 10081800-10091881 Medicago truncatula
Medtr1g029410 0.5kb downstream 0.5kb downstream 500 false chr1: 10091382-10091881 Medicago truncatula
Medtr1g029410 1.0kb upstream 1.0kb upstream 10582 true chr1: 10080800-10091381 Medicago truncatula
Medtr1g029410 1.0kb upstream 1.0kb upstream 1000 false chr1: 10080800-10081799 Medicago truncatula
Medtr1g029410 1.0kb downstream 1.0kb downstream 10582 true chr1: 10081800-10092381 Medicago truncatula
Medtr1g029410 1.0kb downstream 1.0kb downstream 1000 false chr1: 10091382-10092381 Medicago truncatula
Medtr1g029410 2.0kb upstream 2.0kb upstream 11582 true chr1: 10079800-10091381 Medicago truncatula
Medtr1g029410 2.0kb upstream 2.0kb upstream 2000 false chr1: 10079800-10081799 Medicago truncatula
Medtr1g029410 2.0kb downstream 2.0kb downstream 11582 true chr1: 10081800-10093381 Medicago truncatula
Medtr1g029410 2.0kb downstream 2.0kb downstream 2000 false chr1: 10091382-10093381 Medicago truncatula
Medtr1g029410 5.0kb upstream 5.0kb upstream 14582 true chr1: 10076800-10091381 Medicago truncatula
Medtr1g029410 5.0kb upstream 5.0kb upstream 5000 false chr1: 10076800-10081799 Medicago truncatula
Medtr1g029410 5.0kb downstream 5.0kb downstream 14582 true chr1: 10081800-10096381 Medicago truncatula
Medtr1g029410 5.0kb downstream 5.0kb downstream 5000 false chr1: 10091382-10096381 Medicago truncatula
Medtr1g029410 10.0kb upstream 10.0kb upstream 19582 true chr1: 10071800-10091381 Medicago truncatula
Medtr1g029410 10.0kb upstream 10.0kb upstream 10000 false chr1: 10071800-10081799 Medicago truncatula
Medtr1g029410 10.0kb downstream 10.0kb downstream 19582 true chr1: 10081800-10101381 Medicago truncatula
Medtr1g029410 10.0kb downstream 10.0kb downstream 10000 false chr1: 10091382-10101381 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303555 5265 Fabidae View MSA
124062252 5270 Rosid View MSA
123736446 5271 Pentapetalae View MSA
122787363 5272 Eudicot View MSA
122044600 5273 Angiosperm View MSA
121347070 5274 Embryophyte View MSA
123425683 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.454        
cufflinks 0.445        
cufflinks 0.532        
cufflinks 0.205        
cufflinks 0.627       High
cufflinks 0.1     Low Low
cufflinks 0.402        
cufflinks 0.425        
cufflinks 0.282        

0 Strain