Gene : Medtr1g029190 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31752:SF8 - AUXIN EFFLUX CARRIER COMPONENT 6-RELATED Description:  auxin efflux carrier family transporter
Genomic Order:  1332 Name:  ? Medtr1g029190
Secondary Identifier:  ? PAC:31094465
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g029190 0.5kb upstream 0.5kb upstream 10503 true chr1: 9960584-9971086 Medicago truncatula
Medtr1g029190 0.5kb upstream 0.5kb upstream 500 false chr1: 9970587-9971086 Medicago truncatula
Medtr1g029190 0.5kb downstream 0.5kb downstream 10503 true chr1: 9960084-9970586 Medicago truncatula
Medtr1g029190 0.5kb downstream 0.5kb downstream 500 false chr1: 9960084-9960583 Medicago truncatula
Medtr1g029190 1.0kb upstream 1.0kb upstream 11003 true chr1: 9960584-9971586 Medicago truncatula
Medtr1g029190 1.0kb upstream 1.0kb upstream 1000 false chr1: 9970587-9971586 Medicago truncatula
Medtr1g029190 1.0kb downstream 1.0kb downstream 11003 true chr1: 9959584-9970586 Medicago truncatula
Medtr1g029190 1.0kb downstream 1.0kb downstream 1000 false chr1: 9959584-9960583 Medicago truncatula
Medtr1g029190 2.0kb upstream 2.0kb upstream 12003 true chr1: 9960584-9972586 Medicago truncatula
Medtr1g029190 2.0kb upstream 2.0kb upstream 2000 false chr1: 9970587-9972586 Medicago truncatula
Medtr1g029190 2.0kb downstream 2.0kb downstream 12003 true chr1: 9958584-9970586 Medicago truncatula
Medtr1g029190 2.0kb downstream 2.0kb downstream 2000 false chr1: 9958584-9960583 Medicago truncatula
Medtr1g029190 5.0kb upstream 5.0kb upstream 15003 true chr1: 9960584-9975586 Medicago truncatula
Medtr1g029190 5.0kb upstream 5.0kb upstream 5000 false chr1: 9970587-9975586 Medicago truncatula
Medtr1g029190 5.0kb downstream 5.0kb downstream 15003 true chr1: 9955584-9970586 Medicago truncatula
Medtr1g029190 5.0kb downstream 5.0kb downstream 5000 false chr1: 9955584-9960583 Medicago truncatula
Medtr1g029190 10.0kb upstream 10.0kb upstream 20003 true chr1: 9960584-9980586 Medicago truncatula
Medtr1g029190 10.0kb upstream 10.0kb upstream 10000 false chr1: 9970587-9980586 Medicago truncatula
Medtr1g029190 10.0kb downstream 10.0kb downstream 20003 true chr1: 9950584-9970586 Medicago truncatula
Medtr1g029190 10.0kb downstream 10.0kb downstream 10000 false chr1: 9950584-9960583 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306166 5265 Fabidae View MSA
124067962 5270 Rosid View MSA
123747841 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 0.017     Low  
cufflinks 0.017     Low  
cufflinks 0.007     Low  
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.005     Low Low
cufflinks 0.049     Low High

0 Strain