Gene : Medtr1g018180 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23315:SF64 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Description:  armadillo/beta-catenin-like repeat protein
Genomic Order:  665 Name:  ? Medtr1g018180
Secondary Identifier:  ? PAC:31099036
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7511 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g018180 0.5kb upstream 0.5kb upstream 2963 true chr1: 5219153-5222115 Medicago truncatula
Medtr1g018180 0.5kb upstream 0.5kb upstream 500 false chr1: 5221616-5222115 Medicago truncatula
Medtr1g018180 0.5kb downstream 0.5kb downstream 2963 true chr1: 5218653-5221615 Medicago truncatula
Medtr1g018180 0.5kb downstream 0.5kb downstream 500 false chr1: 5218653-5219152 Medicago truncatula
Medtr1g018180 1.0kb upstream 1.0kb upstream 3463 true chr1: 5219153-5222615 Medicago truncatula
Medtr1g018180 1.0kb upstream 1.0kb upstream 1000 false chr1: 5221616-5222615 Medicago truncatula
Medtr1g018180 1.0kb downstream 1.0kb downstream 3463 true chr1: 5218153-5221615 Medicago truncatula
Medtr1g018180 1.0kb downstream 1.0kb downstream 1000 false chr1: 5218153-5219152 Medicago truncatula
Medtr1g018180 2.0kb upstream 2.0kb upstream 4463 true chr1: 5219153-5223615 Medicago truncatula
Medtr1g018180 2.0kb upstream 2.0kb upstream 2000 false chr1: 5221616-5223615 Medicago truncatula
Medtr1g018180 2.0kb downstream 2.0kb downstream 4463 true chr1: 5217153-5221615 Medicago truncatula
Medtr1g018180 2.0kb downstream 2.0kb downstream 2000 false chr1: 5217153-5219152 Medicago truncatula
Medtr1g018180 5.0kb upstream 5.0kb upstream 7463 true chr1: 5219153-5226615 Medicago truncatula
Medtr1g018180 5.0kb upstream 5.0kb upstream 5000 false chr1: 5221616-5226615 Medicago truncatula
Medtr1g018180 5.0kb downstream 5.0kb downstream 7463 true chr1: 5214153-5221615 Medicago truncatula
Medtr1g018180 5.0kb downstream 5.0kb downstream 5000 false chr1: 5214153-5219152 Medicago truncatula
Medtr1g018180 10.0kb upstream 10.0kb upstream 12463 true chr1: 5219153-5231615 Medicago truncatula
Medtr1g018180 10.0kb upstream 10.0kb upstream 10000 false chr1: 5221616-5231615 Medicago truncatula
Medtr1g018180 10.0kb downstream 10.0kb downstream 12463 true chr1: 5209153-5221615 Medicago truncatula
Medtr1g018180 10.0kb downstream 10.0kb downstream 10000 false chr1: 5209153-5219152 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305892 5265 Fabidae View MSA
124062605 5270 Rosid View MSA
123738053 5271 Pentapetalae View MSA
122796694 5272 Eudicot View MSA
122047574 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.947     High  
cufflinks 10.616     High Low
cufflinks 18.387     High  
cufflinks 34.572     High  
cufflinks 14.723     High  
cufflinks 27.203     High  
cufflinks 37.865     High  
cufflinks 11.38     High Low
cufflinks 47.118     High High

0 Strain