Gene : Medtr1g018090 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR16223:SF9 - TRANSCRIPTION FACTOR BHLH139-RELATED Description:  helix loop helix DNA-binding domain protein
Genomic Order:  671 Name:  ? Medtr1g018090
Secondary Identifier:  ? PAC:31093625
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g018090 0.5kb upstream 0.5kb upstream 2343 true chr1: 5271864-5274206 Medicago truncatula
Medtr1g018090 0.5kb upstream 0.5kb upstream 500 false chr1: 5273707-5274206 Medicago truncatula
Medtr1g018090 0.5kb downstream 0.5kb downstream 2343 true chr1: 5271364-5273706 Medicago truncatula
Medtr1g018090 0.5kb downstream 0.5kb downstream 500 false chr1: 5271364-5271863 Medicago truncatula
Medtr1g018090 1.0kb upstream 1.0kb upstream 2843 true chr1: 5271864-5274706 Medicago truncatula
Medtr1g018090 1.0kb upstream 1.0kb upstream 1000 false chr1: 5273707-5274706 Medicago truncatula
Medtr1g018090 1.0kb downstream 1.0kb downstream 2843 true chr1: 5270864-5273706 Medicago truncatula
Medtr1g018090 1.0kb downstream 1.0kb downstream 1000 false chr1: 5270864-5271863 Medicago truncatula
Medtr1g018090 2.0kb upstream 2.0kb upstream 3843 true chr1: 5271864-5275706 Medicago truncatula
Medtr1g018090 2.0kb upstream 2.0kb upstream 2000 false chr1: 5273707-5275706 Medicago truncatula
Medtr1g018090 2.0kb downstream 2.0kb downstream 3843 true chr1: 5269864-5273706 Medicago truncatula
Medtr1g018090 2.0kb downstream 2.0kb downstream 2000 false chr1: 5269864-5271863 Medicago truncatula
Medtr1g018090 5.0kb upstream 5.0kb upstream 6843 true chr1: 5271864-5278706 Medicago truncatula
Medtr1g018090 5.0kb upstream 5.0kb upstream 5000 false chr1: 5273707-5278706 Medicago truncatula
Medtr1g018090 5.0kb downstream 5.0kb downstream 6843 true chr1: 5266864-5273706 Medicago truncatula
Medtr1g018090 5.0kb downstream 5.0kb downstream 5000 false chr1: 5266864-5271863 Medicago truncatula
Medtr1g018090 10.0kb upstream 10.0kb upstream 11843 true chr1: 5271864-5283706 Medicago truncatula
Medtr1g018090 10.0kb upstream 10.0kb upstream 10000 false chr1: 5273707-5283706 Medicago truncatula
Medtr1g018090 10.0kb downstream 10.0kb downstream 11843 true chr1: 5261864-5273706 Medicago truncatula
Medtr1g018090 10.0kb downstream 10.0kb downstream 10000 false chr1: 5261864-5271863 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300235 5265 Fabidae View MSA
124070133 5270 Rosid View MSA
123748032 5271 Pentapetalae View MSA
122792151 5272 Eudicot View MSA
122043833 5273 Angiosperm View MSA
121310197 5274 Embryophyte View MSA
123347755 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.209        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  

0 Strain