Gene : Medtr1g018020 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF15811 - Small VCP/p97-interacting protein (SVIP) Description:  hypothetical protein
Genomic Order:  658 Name:  ? Medtr1g018020
Secondary Identifier:  ? PAC:31099538
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g018020 0.5kb upstream 0.5kb upstream 2425 true chr1: 5156133-5158557 Medicago truncatula
Medtr1g018020 0.5kb upstream 0.5kb upstream 500 false chr1: 5156133-5156632 Medicago truncatula
Medtr1g018020 0.5kb downstream 0.5kb downstream 2425 true chr1: 5156633-5159057 Medicago truncatula
Medtr1g018020 0.5kb downstream 0.5kb downstream 500 false chr1: 5158558-5159057 Medicago truncatula
Medtr1g018020 1.0kb upstream 1.0kb upstream 2925 true chr1: 5155633-5158557 Medicago truncatula
Medtr1g018020 1.0kb upstream 1.0kb upstream 1000 false chr1: 5155633-5156632 Medicago truncatula
Medtr1g018020 1.0kb downstream 1.0kb downstream 2925 true chr1: 5156633-5159557 Medicago truncatula
Medtr1g018020 1.0kb downstream 1.0kb downstream 1000 false chr1: 5158558-5159557 Medicago truncatula
Medtr1g018020 2.0kb upstream 2.0kb upstream 3925 true chr1: 5154633-5158557 Medicago truncatula
Medtr1g018020 2.0kb upstream 2.0kb upstream 2000 false chr1: 5154633-5156632 Medicago truncatula
Medtr1g018020 2.0kb downstream 2.0kb downstream 3925 true chr1: 5156633-5160557 Medicago truncatula
Medtr1g018020 2.0kb downstream 2.0kb downstream 2000 false chr1: 5158558-5160557 Medicago truncatula
Medtr1g018020 5.0kb upstream 5.0kb upstream 6925 true chr1: 5151633-5158557 Medicago truncatula
Medtr1g018020 5.0kb upstream 5.0kb upstream 5000 false chr1: 5151633-5156632 Medicago truncatula
Medtr1g018020 5.0kb downstream 5.0kb downstream 6925 true chr1: 5156633-5163557 Medicago truncatula
Medtr1g018020 5.0kb downstream 5.0kb downstream 5000 false chr1: 5158558-5163557 Medicago truncatula
Medtr1g018020 10.0kb upstream 10.0kb upstream 11925 true chr1: 5146633-5158557 Medicago truncatula
Medtr1g018020 10.0kb upstream 10.0kb upstream 10000 false chr1: 5146633-5156632 Medicago truncatula
Medtr1g018020 10.0kb downstream 10.0kb downstream 11925 true chr1: 5156633-5168557 Medicago truncatula
Medtr1g018020 10.0kb downstream 10.0kb downstream 10000 false chr1: 5158558-5168557 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303094 5265 Fabidae View MSA
124072896 5270 Rosid View MSA
123736483 5271 Pentapetalae View MSA
122789828 5272 Eudicot View MSA
122050042 5273 Angiosperm View MSA
121311703 5274 Embryophyte View MSA
123348966 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.735        
cufflinks 1.675       Low
cufflinks 2.84        
cufflinks 7.083        
cufflinks 2.074        
cufflinks 13.97     High High
cufflinks 4.682        
cufflinks 2.285        
cufflinks 4.75        

0 Strain