Gene : Medtr1g017950 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24206:SF35 - TRANSCRIPTION FACTOR-RELATED Description:  GATA type zinc finger transcription factor family protein
Genomic Order:  654 Name:  ? Medtr1g017950
Secondary Identifier:  ? PAC:31096721
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g017950 0.5kb upstream 0.5kb upstream 2682 true chr1: 5123274-5125955 Medicago truncatula
Medtr1g017950 0.5kb upstream 0.5kb upstream 500 false chr1: 5125456-5125955 Medicago truncatula
Medtr1g017950 0.5kb downstream 0.5kb downstream 2682 true chr1: 5122774-5125455 Medicago truncatula
Medtr1g017950 0.5kb downstream 0.5kb downstream 500 false chr1: 5122774-5123273 Medicago truncatula
Medtr1g017950 1.0kb upstream 1.0kb upstream 3182 true chr1: 5123274-5126455 Medicago truncatula
Medtr1g017950 1.0kb upstream 1.0kb upstream 1000 false chr1: 5125456-5126455 Medicago truncatula
Medtr1g017950 1.0kb downstream 1.0kb downstream 3182 true chr1: 5122274-5125455 Medicago truncatula
Medtr1g017950 1.0kb downstream 1.0kb downstream 1000 false chr1: 5122274-5123273 Medicago truncatula
Medtr1g017950 2.0kb upstream 2.0kb upstream 4182 true chr1: 5123274-5127455 Medicago truncatula
Medtr1g017950 2.0kb upstream 2.0kb upstream 2000 false chr1: 5125456-5127455 Medicago truncatula
Medtr1g017950 2.0kb downstream 2.0kb downstream 4182 true chr1: 5121274-5125455 Medicago truncatula
Medtr1g017950 2.0kb downstream 2.0kb downstream 2000 false chr1: 5121274-5123273 Medicago truncatula
Medtr1g017950 5.0kb upstream 5.0kb upstream 7182 true chr1: 5123274-5130455 Medicago truncatula
Medtr1g017950 5.0kb upstream 5.0kb upstream 5000 false chr1: 5125456-5130455 Medicago truncatula
Medtr1g017950 5.0kb downstream 5.0kb downstream 7182 true chr1: 5118274-5125455 Medicago truncatula
Medtr1g017950 5.0kb downstream 5.0kb downstream 5000 false chr1: 5118274-5123273 Medicago truncatula
Medtr1g017950 10.0kb upstream 10.0kb upstream 12182 true chr1: 5123274-5135455 Medicago truncatula
Medtr1g017950 10.0kb upstream 10.0kb upstream 10000 false chr1: 5125456-5135455 Medicago truncatula
Medtr1g017950 10.0kb downstream 10.0kb downstream 12182 true chr1: 5113274-5125455 Medicago truncatula
Medtr1g017950 10.0kb downstream 10.0kb downstream 10000 false chr1: 5113274-5123273 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309325 5265 Fabidae View MSA
124066867 5270 Rosid View MSA
123744734 5271 Pentapetalae View MSA
122789493 5272 Eudicot View MSA
122049992 5273 Angiosperm View MSA
121348284 5274 Embryophyte View MSA
123426269 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.386       Low
cufflinks 10.626     High  
cufflinks 15.29     High  
cufflinks 2.378        
cufflinks 14.989     High  
cufflinks 2.54        
cufflinks 5.834        
cufflinks 12.077     High  
cufflinks 7.407        

0 Strain