Gene : Medtr1g018710 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR34362:SF1 - WPP DOMAIN-CONTAINING PROTEIN 1-RELATED Description:  MFP1 attachment factor-like protein
Genomic Order:  696 Name:  ? Medtr1g018710
Secondary Identifier:  ? PAC:31098390
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g018710 0.5kb upstream 0.5kb upstream 1317 true chr1: 5452615-5453931 Medicago truncatula
Medtr1g018710 0.5kb upstream 0.5kb upstream 500 false chr1: 5452615-5453114 Medicago truncatula
Medtr1g018710 0.5kb downstream 0.5kb downstream 1317 true chr1: 5453115-5454431 Medicago truncatula
Medtr1g018710 0.5kb downstream 0.5kb downstream 500 false chr1: 5453932-5454431 Medicago truncatula
Medtr1g018710 1.0kb upstream 1.0kb upstream 1817 true chr1: 5452115-5453931 Medicago truncatula
Medtr1g018710 1.0kb upstream 1.0kb upstream 1000 false chr1: 5452115-5453114 Medicago truncatula
Medtr1g018710 1.0kb downstream 1.0kb downstream 1817 true chr1: 5453115-5454931 Medicago truncatula
Medtr1g018710 1.0kb downstream 1.0kb downstream 1000 false chr1: 5453932-5454931 Medicago truncatula
Medtr1g018710 2.0kb upstream 2.0kb upstream 2817 true chr1: 5451115-5453931 Medicago truncatula
Medtr1g018710 2.0kb upstream 2.0kb upstream 2000 false chr1: 5451115-5453114 Medicago truncatula
Medtr1g018710 2.0kb downstream 2.0kb downstream 2817 true chr1: 5453115-5455931 Medicago truncatula
Medtr1g018710 2.0kb downstream 2.0kb downstream 2000 false chr1: 5453932-5455931 Medicago truncatula
Medtr1g018710 5.0kb upstream 5.0kb upstream 5817 true chr1: 5448115-5453931 Medicago truncatula
Medtr1g018710 5.0kb upstream 5.0kb upstream 5000 false chr1: 5448115-5453114 Medicago truncatula
Medtr1g018710 5.0kb downstream 5.0kb downstream 5817 true chr1: 5453115-5458931 Medicago truncatula
Medtr1g018710 5.0kb downstream 5.0kb downstream 5000 false chr1: 5453932-5458931 Medicago truncatula
Medtr1g018710 10.0kb upstream 10.0kb upstream 10817 true chr1: 5443115-5453931 Medicago truncatula
Medtr1g018710 10.0kb upstream 10.0kb upstream 10000 false chr1: 5443115-5453114 Medicago truncatula
Medtr1g018710 10.0kb downstream 10.0kb downstream 10817 true chr1: 5453115-5463931 Medicago truncatula
Medtr1g018710 10.0kb downstream 10.0kb downstream 10000 false chr1: 5453932-5463931 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313692 5265 Fabidae View MSA
124061872 5270 Rosid View MSA
123739220 5271 Pentapetalae View MSA
122792231 5272 Eudicot View MSA
122045089 5273 Angiosperm View MSA
121310396 5274 Embryophyte View MSA
123347890 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.096        
cufflinks 1.044        
cufflinks 0.953        
cufflinks 10.914     High High
cufflinks 1.901        
cufflinks 7.484        
cufflinks 3.091        
cufflinks 0.729       Low
cufflinks 11.105     High High

0 Strain