Gene : Medtr1g018440 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31807:SF8 - QWRF MOTIF-CONTAINING PROTEIN 9 Description:  DUF566 family protein
Genomic Order:  674 Name:  ? Medtr1g018440
Secondary Identifier:  ? PAC:31100707
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g018440 0.5kb upstream 0.5kb upstream 5143 true chr1: 5309252-5314394 Medicago truncatula
Medtr1g018440 0.5kb upstream 0.5kb upstream 500 false chr1: 5313895-5314394 Medicago truncatula
Medtr1g018440 0.5kb downstream 0.5kb downstream 5143 true chr1: 5308752-5313894 Medicago truncatula
Medtr1g018440 0.5kb downstream 0.5kb downstream 500 false chr1: 5308752-5309251 Medicago truncatula
Medtr1g018440 1.0kb upstream 1.0kb upstream 5643 true chr1: 5309252-5314894 Medicago truncatula
Medtr1g018440 1.0kb upstream 1.0kb upstream 1000 false chr1: 5313895-5314894 Medicago truncatula
Medtr1g018440 1.0kb downstream 1.0kb downstream 5643 true chr1: 5308252-5313894 Medicago truncatula
Medtr1g018440 1.0kb downstream 1.0kb downstream 1000 false chr1: 5308252-5309251 Medicago truncatula
Medtr1g018440 2.0kb upstream 2.0kb upstream 6643 true chr1: 5309252-5315894 Medicago truncatula
Medtr1g018440 2.0kb upstream 2.0kb upstream 2000 false chr1: 5313895-5315894 Medicago truncatula
Medtr1g018440 2.0kb downstream 2.0kb downstream 6643 true chr1: 5307252-5313894 Medicago truncatula
Medtr1g018440 2.0kb downstream 2.0kb downstream 2000 false chr1: 5307252-5309251 Medicago truncatula
Medtr1g018440 5.0kb upstream 5.0kb upstream 9643 true chr1: 5309252-5318894 Medicago truncatula
Medtr1g018440 5.0kb upstream 5.0kb upstream 5000 false chr1: 5313895-5318894 Medicago truncatula
Medtr1g018440 5.0kb downstream 5.0kb downstream 9643 true chr1: 5304252-5313894 Medicago truncatula
Medtr1g018440 5.0kb downstream 5.0kb downstream 5000 false chr1: 5304252-5309251 Medicago truncatula
Medtr1g018440 10.0kb upstream 10.0kb upstream 14643 true chr1: 5309252-5323894 Medicago truncatula
Medtr1g018440 10.0kb upstream 10.0kb upstream 10000 false chr1: 5313895-5323894 Medicago truncatula
Medtr1g018440 10.0kb downstream 10.0kb downstream 14643 true chr1: 5299252-5313894 Medicago truncatula
Medtr1g018440 10.0kb downstream 10.0kb downstream 10000 false chr1: 5299252-5309251 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301347 5265 Fabidae View MSA
124072070 5270 Rosid View MSA
123747124 5271 Pentapetalae View MSA
122796341 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.131       Low
cufflinks 0.517        
cufflinks 0.299        
cufflinks 0.108       Low
cufflinks 0.734       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.327        
cufflinks 0.32        
cufflinks 0.417        

0 Strain