Gene : Medtr1g019340 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24356:SF195 - PROTEIN KINASE FAMILY PROTEIN Description:  AGC kinase
Genomic Order:  742 Name:  ? Medtr1g019340
Secondary Identifier:  ? PAC:31092823
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g019340 0.5kb upstream 0.5kb upstream 7972 true chr1: 5812024-5819995 Medicago truncatula
Medtr1g019340 0.5kb upstream 0.5kb upstream 500 false chr1: 5812024-5812523 Medicago truncatula
Medtr1g019340 0.5kb downstream 0.5kb downstream 7972 true chr1: 5812524-5820495 Medicago truncatula
Medtr1g019340 0.5kb downstream 0.5kb downstream 500 false chr1: 5819996-5820495 Medicago truncatula
Medtr1g019340 1.0kb upstream 1.0kb upstream 8472 true chr1: 5811524-5819995 Medicago truncatula
Medtr1g019340 1.0kb upstream 1.0kb upstream 1000 false chr1: 5811524-5812523 Medicago truncatula
Medtr1g019340 1.0kb downstream 1.0kb downstream 8472 true chr1: 5812524-5820995 Medicago truncatula
Medtr1g019340 1.0kb downstream 1.0kb downstream 1000 false chr1: 5819996-5820995 Medicago truncatula
Medtr1g019340 2.0kb upstream 2.0kb upstream 9472 true chr1: 5810524-5819995 Medicago truncatula
Medtr1g019340 2.0kb upstream 2.0kb upstream 2000 false chr1: 5810524-5812523 Medicago truncatula
Medtr1g019340 2.0kb downstream 2.0kb downstream 9472 true chr1: 5812524-5821995 Medicago truncatula
Medtr1g019340 2.0kb downstream 2.0kb downstream 2000 false chr1: 5819996-5821995 Medicago truncatula
Medtr1g019340 5.0kb upstream 5.0kb upstream 12472 true chr1: 5807524-5819995 Medicago truncatula
Medtr1g019340 5.0kb upstream 5.0kb upstream 5000 false chr1: 5807524-5812523 Medicago truncatula
Medtr1g019340 5.0kb downstream 5.0kb downstream 12472 true chr1: 5812524-5824995 Medicago truncatula
Medtr1g019340 5.0kb downstream 5.0kb downstream 5000 false chr1: 5819996-5824995 Medicago truncatula
Medtr1g019340 10.0kb upstream 10.0kb upstream 17472 true chr1: 5802524-5819995 Medicago truncatula
Medtr1g019340 10.0kb upstream 10.0kb upstream 10000 false chr1: 5802524-5812523 Medicago truncatula
Medtr1g019340 10.0kb downstream 10.0kb downstream 17472 true chr1: 5812524-5829995 Medicago truncatula
Medtr1g019340 10.0kb downstream 10.0kb downstream 10000 false chr1: 5819996-5829995 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030206 5273 Angiosperm View MSA
122303301 5265 Fabidae View MSA
124066801 5270 Rosid View MSA
123738504 5271 Pentapetalae View MSA
122787356 5272 Eudicot View MSA
121299416 5274 Embryophyte View MSA
123428649 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.537     High High
cufflinks 2.739        
cufflinks 3.011        
cufflinks 2.554        
cufflinks 3.034        
cufflinks 2.425        
cufflinks 4.437        
cufflinks 2.276        
cufflinks 6.868       High

0 Strain