Gene : Medtr1g019200 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR14155//PTHR14155:SF72 - RING FINGER DOMAIN-CONTAINING Description:  zinc finger (C3HC4-type RING finger) family protein
Genomic Order:  731 Name:  ? Medtr1g019200
Secondary Identifier:  ? PAC:31100506
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g019200 0.5kb upstream 0.5kb upstream 7171 true chr1: 5739991-5747161 Medicago truncatula
Medtr1g019200 0.5kb upstream 0.5kb upstream 500 false chr1: 5739991-5740490 Medicago truncatula
Medtr1g019200 0.5kb downstream 0.5kb downstream 7171 true chr1: 5740491-5747661 Medicago truncatula
Medtr1g019200 0.5kb downstream 0.5kb downstream 500 false chr1: 5747162-5747661 Medicago truncatula
Medtr1g019200 1.0kb upstream 1.0kb upstream 7671 true chr1: 5739491-5747161 Medicago truncatula
Medtr1g019200 1.0kb upstream 1.0kb upstream 1000 false chr1: 5739491-5740490 Medicago truncatula
Medtr1g019200 1.0kb downstream 1.0kb downstream 7671 true chr1: 5740491-5748161 Medicago truncatula
Medtr1g019200 1.0kb downstream 1.0kb downstream 1000 false chr1: 5747162-5748161 Medicago truncatula
Medtr1g019200 2.0kb upstream 2.0kb upstream 8671 true chr1: 5738491-5747161 Medicago truncatula
Medtr1g019200 2.0kb upstream 2.0kb upstream 2000 false chr1: 5738491-5740490 Medicago truncatula
Medtr1g019200 2.0kb downstream 2.0kb downstream 8671 true chr1: 5740491-5749161 Medicago truncatula
Medtr1g019200 2.0kb downstream 2.0kb downstream 2000 false chr1: 5747162-5749161 Medicago truncatula
Medtr1g019200 5.0kb upstream 5.0kb upstream 11671 true chr1: 5735491-5747161 Medicago truncatula
Medtr1g019200 5.0kb upstream 5.0kb upstream 5000 false chr1: 5735491-5740490 Medicago truncatula
Medtr1g019200 5.0kb downstream 5.0kb downstream 11671 true chr1: 5740491-5752161 Medicago truncatula
Medtr1g019200 5.0kb downstream 5.0kb downstream 5000 false chr1: 5747162-5752161 Medicago truncatula
Medtr1g019200 10.0kb upstream 10.0kb upstream 16671 true chr1: 5730491-5747161 Medicago truncatula
Medtr1g019200 10.0kb upstream 10.0kb upstream 10000 false chr1: 5730491-5740490 Medicago truncatula
Medtr1g019200 10.0kb downstream 10.0kb downstream 16671 true chr1: 5740491-5757161 Medicago truncatula
Medtr1g019200 10.0kb downstream 10.0kb downstream 10000 false chr1: 5747162-5757161 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304615 5265 Fabidae View MSA
124061889 5270 Rosid View MSA
123751364 5271 Pentapetalae View MSA
122793070 5272 Eudicot View MSA
122041627 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351500 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.823        
cufflinks 2.356        
cufflinks 2.037        
cufflinks 1.916        
cufflinks 2.469        
cufflinks 0.792       Low
cufflinks 2.533        
cufflinks 1.719        
cufflinks 2.683        

0 Strain