Gene : Medtr1g019970 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.14.99.3 - Heme oxygenase (biliverdin-producing) / Heme oxygenase (decyclizing) Description:  heme oxygenase 1 protein
Genomic Order:  798 Name:  ? Medtr1g019970
Secondary Identifier:  ? PAC:31097403
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5874 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g019970 0.5kb upstream 0.5kb upstream 4394 true chr1: 6108905-6113298 Medicago truncatula
Medtr1g019970 0.5kb upstream 0.5kb upstream 500 false chr1: 6108905-6109404 Medicago truncatula
Medtr1g019970 0.5kb downstream 0.5kb downstream 4394 true chr1: 6109405-6113798 Medicago truncatula
Medtr1g019970 0.5kb downstream 0.5kb downstream 500 false chr1: 6113299-6113798 Medicago truncatula
Medtr1g019970 1.0kb upstream 1.0kb upstream 4894 true chr1: 6108405-6113298 Medicago truncatula
Medtr1g019970 1.0kb upstream 1.0kb upstream 1000 false chr1: 6108405-6109404 Medicago truncatula
Medtr1g019970 1.0kb downstream 1.0kb downstream 4894 true chr1: 6109405-6114298 Medicago truncatula
Medtr1g019970 1.0kb downstream 1.0kb downstream 1000 false chr1: 6113299-6114298 Medicago truncatula
Medtr1g019970 2.0kb upstream 2.0kb upstream 5894 true chr1: 6107405-6113298 Medicago truncatula
Medtr1g019970 2.0kb upstream 2.0kb upstream 2000 false chr1: 6107405-6109404 Medicago truncatula
Medtr1g019970 2.0kb downstream 2.0kb downstream 5894 true chr1: 6109405-6115298 Medicago truncatula
Medtr1g019970 2.0kb downstream 2.0kb downstream 2000 false chr1: 6113299-6115298 Medicago truncatula
Medtr1g019970 5.0kb upstream 5.0kb upstream 8894 true chr1: 6104405-6113298 Medicago truncatula
Medtr1g019970 5.0kb upstream 5.0kb upstream 5000 false chr1: 6104405-6109404 Medicago truncatula
Medtr1g019970 5.0kb downstream 5.0kb downstream 8894 true chr1: 6109405-6118298 Medicago truncatula
Medtr1g019970 5.0kb downstream 5.0kb downstream 5000 false chr1: 6113299-6118298 Medicago truncatula
Medtr1g019970 10.0kb upstream 10.0kb upstream 13894 true chr1: 6099405-6113298 Medicago truncatula
Medtr1g019970 10.0kb upstream 10.0kb upstream 10000 false chr1: 6099405-6109404 Medicago truncatula
Medtr1g019970 10.0kb downstream 10.0kb downstream 13894 true chr1: 6109405-6123298 Medicago truncatula
Medtr1g019970 10.0kb downstream 10.0kb downstream 10000 false chr1: 6113299-6123298 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310013 5265 Fabidae View MSA
124063078 5270 Rosid View MSA
123741198 5271 Pentapetalae View MSA
122793273 5272 Eudicot View MSA
122045580 5273 Angiosperm View MSA
121310469 5274 Embryophyte View MSA
123347942 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.316        
cufflinks 1.69        
cufflinks 1.887        
cufflinks 0.252        
cufflinks 2.566       High
cufflinks 0.066     Low Low
cufflinks 0.268        
cufflinks 1.643        
cufflinks 0.229        

0 Strain